Microbulbifer sp. SH-1: GNX18_02860
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Entry
GNX18_02860 CDS
T10373
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
micl Microbulbifer sp. SH-1
Pathway
micl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNX18_02860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micl03019
]
GNX18_02860 (recQ)
03400 DNA repair and recombination proteins [BR:
micl03400
]
GNX18_02860 (recQ)
Enzymes [BR:
micl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNX18_02860 (recQ)
Messenger RNA biogenesis [BR:
micl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GNX18_02860 (recQ)
DNA repair and recombination proteins [BR:
micl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GNX18_02860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Glce_b_sandwich
Motif
Other DBs
NCBI-ProteinID:
QIL88822
LinkDB
All DBs
Position
complement(646352..648220)
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AA seq
622 aa
AA seq
DB search
MTESHPAPATSNSAGNPHFILEHTFGYTGFRGDQEAIINTLVAGDDALVLMPTGGGKSLC
YQIPALARPGCGIVISPLIALMQDQVEALRAAGVAAAFLNSSLDFDEAQQIESRLLQGEL
DLLYLAPERLLQPRTLDLLARAKISLFAIDEAHCVSQWGHDFRADYLQLSCLHQRFPEVP
RVALTATADQRTRREIAQRLDLANARHFVSSFDRPNIQYRIAPKNNPKRQLLQFLHSEQQ
GNAGVVYCLSRNKVESTADWLQQQGFNALPYHAGLSAHVRAEHQRRFLREEGVIMVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGEPATALLLYGLEDVVKLSQMAATS
EGSEEHKRQERQRLDAMLGLCEITSCRRRALLRYFEEELAADCGNCDTCLEAPATWDASE
AARKLMSAVYRTGQRFGAAHVIDVLRGADTEKVRQFGHDRNSTYGIGADMSANEWRAIAR
QLVVRGYLQVNAEAFNALQLTEQCRPVLRGEETLLLRTLPKSAPAKASGRDTSAGAPRAE
ISAEDQPLWDALRALRKSLAEERGVPPYVVFHDATLREMLSARPRNRDEMLAISGIGDSK
LAKFGEPFLALLQEFEPACTDV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcacacccggctccggccacatccaactccgcgggcaacccccactttatc
ctcgagcacacgttcggctacaccggattccgcggtgatcaagaagcgatcatcaacacc
ctggtagccggtgatgatgcactggtgctgatgcccaccggtggtggcaaatccctgtgt
taccagattccggcgctggcgcgccccggatgcgggattgtgatttcgccactcatcgca
ctgatgcaggaccaggtggaggccctgcgggccgccggtgtggccgcggctttcctgaac
tcgtcgctggatttcgacgaggcccagcagatcgaaagccggctgctgcaaggcgagctg
gacctgctctacctggcgccggagcggctgttgcaaccccgcaccctggatctgctggcg
cgcgcaaaaatctcgctcttcgccattgacgaggcccattgtgtgagccagtggggacat
gatttccgcgccgactatctgcagctttcctgcctgcatcagcgttttcccgaggtgccg
cgggttgccctcaccgccactgcagaccagcgcacacgacgggaaattgcccagcgcctg
gacttggcgaatgcgcgccacttcgtcagcagcttcgaccgcccgaatatccagtaccgc
atcgcccccaaaaacaaccccaagcgccaactgctgcagttcctgcacagcgagcagcag
ggcaacgccggcgtggtctactgcctttcccgcaacaaggtggaatccaccgcggactgg
ctgcaacagcagggattcaacgccctgccctaccacgcgggcttgtcggcccatgtccgc
gccgagcaccagcgccgcttcttgcgggaagaaggcgtaatcatggtggccaccatcgcg
ttcggcatggggatcgacaagccggatgtgcgcttcgtcgcccatctcgacctgcccaaa
agcatcgaagcctattaccaggagaccgggcgcgccgggcgcgacggcgaacccgccacc
gcgctactgctgtatggcctcgaagacgtggtgaaactgagccagatggcggccacctca
gaaggcagcgaagagcacaaacgccaggagcgccagcggcttgatgccatgctgggacta
tgcgaaatcaccagctgccggcgccgcgccctcctgcgctatttcgaagaggaactggcg
gcggactgcggcaattgcgacacctgcctggaagcgcccgccacctgggatgcgagcgag
gccgcacgtaagttaatgtccgcggtctaccggaccggccagcgctttggcgcggcccat
gtgatcgacgtgctgcggggggctgataccgaaaaagtccgccagtttggtcacgaccgg
aactccacctacggcataggtgccgatatgagcgccaatgagtggcgcgccatcgcccgt
cagttggtggtgcgaggctatttgcaggtcaacgctgaagcgttcaacgcactgcaatta
accgagcaatgccggccggtgctgcgcggtgaggaaaccctgttgctccgcaccttgccg
aaatccgctcccgccaaagcctccgggcgcgataccagcgccggcgccccccgcgcggaa
atttccgcggaagatcaaccgctgtgggacgcactgcgcgctctgcgcaaatccctggcg
gaggaacgcggcgtgcctccgtacgtggttttccacgacgccaccctgcgggaaatgctc
agcgcccgcccccgcaatcgcgacgagatgctggcaatatctggtatcggcgacagcaag
ttggcgaaattcggggaaccgtttctggcgctgttgcaggagtttgaacccgcttgcaca
gacgtctga
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