Microbulbifer sp. SH-1: GNX18_04970
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Entry
GNX18_04970 CDS
T10373
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
micl Microbulbifer sp. SH-1
Pathway
micl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
micl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GNX18_04970 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
micl01007
]
GNX18_04970 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micl03016
]
GNX18_04970 (serS)
Enzymes [BR:
micl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
GNX18_04970 (serS)
Amino acid related enzymes [BR:
micl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GNX18_04970 (serS)
Transfer RNA biogenesis [BR:
micl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GNX18_04970 (serS)
Prokaryotic type
GNX18_04970 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
KIF21A
EzrA
Uso1_p115_C
DUF4407
PCRF
tRNA-synt_His
FapA
BAR_4
DUF1664
DUF3450
DUF2203
Motif
Other DBs
NCBI-ProteinID:
QIL89185
UniProt:
A0A6G8DBW0
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All DBs
Position
1108015..1109289
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AA seq
424 aa
AA seq
DB search
MLDPKLIRTQLDDVAAALAKRGVQLDKAKLEQLEEQRKELQVRTEALQNERNSKSKNIGR
AKASGEDIAPLLKEVESLGGQLTEAKQALTELQEQLDDMLLAIPNLPHESVPEGKDESDN
VEVRQWGTPRSFDFEVRDHVDLGARLKGLDFEVASKITGSRFAVMTGQVAKLHRALAQFM
LDLHIEEHGYQEANVPVIVNSDSLYGTSQLPKFAEDLFKLEDERGFYLIPTAEVPLTNLY
RDEIVDAASLPQKFVSHTNCFRSEAGSHGRDTRGMIRQHQFEKVELVWFAHPDHSMDALE
QLTSHAENVLQKLNLPYRTVVLCGGDMGFGATKTYDLEVWIPSQDKYREISSCSLMGDFQ
ARRMKARWRNPETGKPELLHTLNGSGLAVGRTLIAVLENYQQADGSIEVPEVLRPYMRGA
TKIG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaaactgattcgtacccaactcgacgacgttgcagcggcgctggccaag
cgcggtgtgcagctggacaaggcaaaactggaacagctcgaagagcagcgcaaggagctg
caagtgcgcaccgaagcgctgcagaacgagcgcaacagcaaatccaagaacatcggtcgt
gccaaggccagtggtgaggatattgcgccgctgctgaaagaagtcgaatccctgggcggt
cagttgaccgaagccaagcaggcactgaccgaactgcaggagcagctcgacgatatgctg
ctcgcgattcccaacctgccgcacgaatccgtgccggaaggcaaggacgagagtgacaac
gtggaagtgcgccagtggggcacaccgcgcagttttgatttcgaggtgcgtgatcacgtc
gacctgggtgcgcggctcaaaggcctggatttcgaagtggcgagcaagattaccggctcg
cgctttgcggtgatgaccggccaggtggcaaaactgcaccgcgccttggcacagttcatg
ctagatctacatatagaagagcacggctaccaagaagccaatgtgccggtcattgtaaat
agcgattccctgtacggtacctcgcagctgcccaagttcgccgaggatctgttcaaactg
gaggatgagcgtggtttctacctcatccccacggcagaggtgcccctgacaaacctgtac
cgcgacgagatcgtcgacgcagcttcactgccacagaagtttgtcagccacaccaactgt
tttcgctccgaggccggctcacacgggcgcgatacccgcggcatgatccggcagcaccag
ttcgagaaagttgagctggtgtggtttgcccacccggaccattccatggacgcgctcgaa
cagctcaccagtcatgcggaaaatgttctgcagaaactgaacctgccataccgcaccgtg
gtgctgtgtggcggcgatatgggtttcggtgcaaccaaaacctatgacctggaagtgtgg
attccgtcccaggacaagtaccgggaaatctcctcctgctcactgatgggcgacttccag
gcccggcgtatgaaggcccgctggcgcaacccggaaacgggcaagccggaactgctgcac
accctgaatggatccgggcttgccgtgggccgtacgctgatcgcggtgctggaaaactac
caacaggccgatggtagtatcgaggtgccggaagtactgcgcccctacatgcggggtgca
accaagatcggctaa
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