KEGG   Microbulbifer sp. SH-1: GNX18_06285
Entry
GNX18_06285       CDS       T10373                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
micl  Microbulbifer sp. SH-1
Pathway
micl03030  DNA replication
micl03430  Mismatch repair
micl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:micl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GNX18_06285 (dnaQ)
   03430 Mismatch repair
    GNX18_06285 (dnaQ)
   03440 Homologous recombination
    GNX18_06285 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:micl03032]
    GNX18_06285 (dnaQ)
   03400 DNA repair and recombination proteins [BR:micl03400]
    GNX18_06285 (dnaQ)
Enzymes [BR:micl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GNX18_06285 (dnaQ)
DNA replication proteins [BR:micl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GNX18_06285 (dnaQ)
DNA repair and recombination proteins [BR:micl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GNX18_06285 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QIL89413
LinkDB
Position
complement(1431970..1432695)
AA seq 241 aa
MRQIVLDTETTGLDPKSGHRIIEIGCVELVNRKLTGRHYHQYINPERQVDDGAIEVHGIT
NEFLVDKPVFAQIADEFMTFCEGAELVIHNAPFDVGFINAELKRLGNPRWQSVAAHCGVL
DTLALAREKHPGQKNNLDALCKRYFVDNSQRDLHGALLDAEILADVYLIMTGGQTDLALA
GADNGSDREEGREAQQLEVGTIRRLSADRAPLAVVRAGAEELEAHESFLALLEKSSGKHF
W
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcggcagatcgtgttggatacggaaacaacgggccttgatcccaagtccggacatcgc
attatcgaaatcggctgtgtggagctggtcaaccgcaagcttaccggtcgccattaccat
cagtacatcaatcctgagcgccaagtggatgatggagcgattgaagtgcatggtatcacc
aacgaatttctcgtggacaaacctgtgttcgcgcaaatcgctgatgagttcatgacgttc
tgtgaaggcgcagagctggtgatccacaatgcccctttcgatgtgggcttcatcaatgcc
gagctcaagcgtcttggtaatccccgttggcagagtgtagcggctcactgcggtgtactg
gatacattggcgctggcgcgcgaaaagcatcctggccaaaagaacaacctggatgccctg
tgtaagcgctattttgtcgataactcgcagcgggatttgcacggcgcactgctcgatgcg
gaaattctggcagacgtttacctgatcatgaccggcggccagacggatctcgcgctggcc
ggcgccgataatggcagcgaccgggaggagggccgagaggcgcaacaattagaggtcggt
acaatccggcgtttgagcgcggaccgagcgccccttgccgtggtgcgtgcgggcgcggaa
gaactggaagctcacgaaagctttctcgctctgttggagaaatcgtcgggcaagcatttc
tggtaa

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