Microbulbifer sp. SH-1: GNX18_09475
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Entry
GNX18_09475 CDS
T10373
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
micl Microbulbifer sp. SH-1
Brite
KEGG Orthology (KO) [BR:
micl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micl03016
]
GNX18_09475 (truB)
Enzymes [BR:
micl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GNX18_09475 (truB)
Transfer RNA biogenesis [BR:
micl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GNX18_09475 (truB)
Prokaryotic type
GNX18_09475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QIL89960
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All DBs
Position
complement(2216434..2217384)
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AA seq
316 aa
AA seq
DB search
MGRRPKWGRQVDGVLLLNKPAGITANDALQKAKRLFFANRAGHTGALDPLATGVLPICFG
EATKFSQYLLDADKRYRSTFCLGMTTETGDADGNVVSTSDASGVTEAQVRKAMEAFRGTI
RQVPSMYSALKYNGQPLYKLARQGIEVEREAREVEIYSYELLKFIPGADSPDKLPRAEIE
VHCSKGTYVRSLAEDLGKVLGVGAFVEKLHRSAAGPYREEDAVTLDELTAERGDGQAELL
DHHLLPADSPASGLPKMILTDDSGYYLRQGQPVMDLQVYRLGDEGDMVRLFLESGEFLGV
GEITDDGRVAPRRLVK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagaccaaaatggggacgccaggtcgacggtgtgctgttgctgaacaagccc
gccggaatcacggccaacgacgccctgcaaaaagccaaacgtctctttttcgccaatcgc
gccggccacaccggtgcgttggacccactggcgaccggtgtactgccgatctgcttcggt
gaggccaccaagttttcccagtacctgttggatgctgacaagcgctatcgcagcaccttc
tgcctcgggatgaccaccgagacaggagatgccgacggcaatgtggtttccactagtgat
gcgtccggggtcaccgaggcgcaggtgcgcaaggcgatggaagctttccgcggcactatc
cgtcaggtgccatccatgtactcggcgctcaagtacaacggccagccgctgtacaaactg
gcgcgccagggcatcgaggtggagcgggaagcgcgggaagtggaaatttattcctacgaa
ttgcttaaatttattcccggggctgactctcctgacaagttgccgcgggcggaaattgag
gtgcactgctccaaggggacctatgtgcgcagtctcgccgaggatctgggcaaagtactc
ggtgtcggtgctttcgtggaaaaactgcaccgcagtgccgccggtccctaccgtgaggag
gatgcggtcaccctggacgagctcactgccgagcgcggtgatggccaggcggaactgctg
gatcaccacctgctgccggcggattctcccgcctccggactgcccaaaatgatccttacg
gatgactcgggttactatctgcgtcagggtcagccggtgatggatctgcaggtctatcgt
ttgggcgatgaaggtgatatggtgcgcctcttcctggaaagtggcgaatttctgggcgtt
ggagagattaccgatgacgggcgggtcgccccccgccggttggtgaaatag
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