Microbulbifer sp. SH-1: GNX18_12820
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Entry
GNX18_12820 CDS
T10373
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
micl Microbulbifer sp. SH-1
Pathway
micl00300
Lysine biosynthesis
micl00470
D-Amino acid metabolism
micl01100
Metabolic pathways
micl01110
Biosynthesis of secondary metabolites
micl01120
Microbial metabolism in diverse environments
micl01230
Biosynthesis of amino acids
Module
micl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
micl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GNX18_12820 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GNX18_12820 (lysA)
Enzymes [BR:
micl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GNX18_12820 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIL90544
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Position
3135460..3136719
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AA seq
419 aa
AA seq
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MSEFHYQQGSLWAEGVSLEQIAEQFGTPTYVYSRAHFERQYKAYADALGDHPGLICYAIK
ANSNLGVLSVLAQLGAGFDIVSAGELERVLMAGGDPRKVVFSGVGKTAAEMRRALEVGVH
CFNVESEAELERLDAVAGELGLVAPVSLRVNPDVDAKTHPYISTGLKENKFGIAIERARD
VYRKVAASANLNAVGVDCHIGSQLTDLAPFLDALDRLLALIDELAEDGTALKHLDLGGGL
GVRYRGEEPPEVSDYLGAVKEKLAGRDLALVLEPGRSISANGGALLTRVEYLKRTEGHNF
AIVDAAMNDNLRPALYQAWQDIVAVTPANGEAESWDIVGPVCETGDFLGKHRPLALEQGQ
LLAMLSAGAYGFTMSSNYNSRTRAAEVLVDGDKTYLVRARETLADLVRGETTVPAKDSM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattccactaccagcagggaagcctgtgggccgagggcgtcagcctcgagcag
atcgccgagcagttcggcacccccacctacgtctacagccgcgcccacttcgagcgccag
tacaaggcctatgccgacgccctcggcgatcacccgggcctgatctgctacgccatcaag
gccaatagcaacctcggcgtcctgtctgtgctggcgcagttgggcgcgggtttcgacatc
gtctccgccggcgagctggagcgcgtgctgatggccggcggcgacccaagaaaggtcgtg
ttctccggcgtcggcaaaaccgccgcggaaatgcgccgcgcactggaagtgggcgtgcac
tgcttcaacgtggaatcggaagcggagctcgagcgcctcgacgcggtggccggcgagttg
ggactggtggccccggtctccctgcgggtaaacccggatgtggacgccaagacccacccc
tacatttccaccggcctcaaggaaaacaaattcggcatcgccatcgaacgcgcccgcgat
gtctaccgcaaggtggccgcctctgcaaacctgaacgccgtgggcgtggactgccacatc
ggctcccagctcaccgacctcgcccccttcctcgatgccctcgaccgattgctggcgctg
atcgatgagctggcggaagacggcaccgcgctcaaacacctggatctcggtggcggcctc
ggcgtgcgctaccgcggcgaggaaccgccggaggtcagcgattatctcggcgcggtaaaa
gagaaactcgccgggcgcgacctggcactggtgctggaacccggccgctccatctccgcc
aatggcggcgcactgctgacccgggtggagtacctgaagcgcaccgaaggccacaacttc
gccattgtcgacgccgccatgaacgacaacctgcgcccggcgctgtaccaggcgtggcag
gatatcgtcgcggtgacgccagccaacggcgaggccgagagctgggatatcgtcggcccg
gtgtgtgaaaccggcgacttcctcggcaagcaccgcccactggcgctggagcagggccag
ctgctggcgatgctctctgccggcgcctacggtttcaccatgagctccaactacaactcc
cgcacccgcgccgcggaagtgctggtggacggcgacaagacctatctggtgcgcgcgcgt
gagaccctcgcggatctggtgcgcggcgaaaccacggtgccggcgaaagattccatgtaa
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