Microbulbifer sp. SH-1: GNX18_18110
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Entry
GNX18_18110 CDS
T10373
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
micl Microbulbifer sp. SH-1
Pathway
micl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GNX18_18110 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micl03021
]
GNX18_18110 (rpoA)
03400 DNA repair and recombination proteins [BR:
micl03400
]
GNX18_18110 (rpoA)
Enzymes [BR:
micl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GNX18_18110 (rpoA)
Transcription machinery [BR:
micl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GNX18_18110 (rpoA)
DNA repair and recombination proteins [BR:
micl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GNX18_18110 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QIL91483
LinkDB
All DBs
Position
4393053..4394057
Genome browser
AA seq
334 aa
AA seq
DB search
MQTAVNEFLTPRRIDVTEYNQNHAKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVEHEYSAIEGVQEDVIEILLNLKEIAVVMHGKDQAVLGLSKKGPGPVTAGDIQVDHD
IEIVNPEHVIANITGDVQLNLRLTVARGRGYQPADARREDEDETRSIGRLQLDASFGPVR
RVSYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEGEKDSQ
PEAKEEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKGDSKLSSL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctgtcaacgagtttttgacacctcgtcgtattgacgtcaccgagtacaac
cagaatcacgccaaagtggttctggaaccgctggagcgtggtttcggccacactctcggc
aacgcactgcgccgcatcctgctgtcttccatgcccggttgcgctgtcaccgaagtggaa
atcgatggtgtggagcatgagtacagtgccatcgaaggtgtgcaggaagatgttatcgaa
atcctgctcaacctgaaggaaattgcggtggtgatgcacggcaaggaccaggcagtgctg
ggtctgagcaagaagggcccgggtccggtgaccgctggcgacatccaggtggatcacgac
attgaaatcgtgaaccccgaacatgttatcgccaacattaccggcgatgtgcaactcaat
ctgcgtctgaccgttgcgcgcggccgtggctatcagcccgccgacgcccgccgcgaagac
gaagatgagacccgttctatcggccgtctgcagctggatgcctcctttggcccggttcgt
cgcgtatcttacagcgtggaatccgcgcgtgttgagcagcgcaccgacctggacaagctg
gttctggatctggaaaccaacggtactctggacccggaagaagcgatccgccgcgccgcc
accatcctgcagcaacagctggcagtgtttgtggatctcgaaggcgagaaggattcccag
ccggaagcgaaggaagaggaagtcgatccggtgctgttgcgcccggtagacgacctggag
ctgaccgtgcgttcggccaactgtctgaaagcggaaaacatctactacatcggcgacctg
attcagcgcaccgaagtagagctgctgaagacgccgaacctgggcaagaaatccctgacc
gagatcaaggatgttctggcctcccgcggcctctccttgggtatgcgcctcgagaactgg
ccgccggccagtctcaaaggcgacagcaagctgagctccctgtaa
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