Microbacterium sp. che218: CHE218_08590
Help
Entry
CHE218_08590 CDS
T10698
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
micm Microbacterium sp. che218
Pathway
micm03030
DNA replication
micm03430
Mismatch repair
micm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHE218_08590 (dnaE)
03430 Mismatch repair
CHE218_08590 (dnaE)
03440 Homologous recombination
CHE218_08590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micm03032
]
CHE218_08590 (dnaE)
03400 DNA repair and recombination proteins [BR:
micm03400
]
CHE218_08590 (dnaE)
Enzymes [BR:
micm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHE218_08590 (dnaE)
DNA replication proteins [BR:
micm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHE218_08590 (dnaE)
DNA repair and recombination proteins [BR:
micm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHE218_08590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BFM23817
LinkDB
All DBs
Position
complement(899476..902940)
Genome browser
AA seq
1154 aa
AA seq
DB search
MLDGAARIGPMVQEAVKQGMPAIAVTDHGNTFAAYEFYKTAKDAGIKPIIGIEAYVTPGT
HRSDKTRVRWGTPEQQSDDVSGSGAYTHMTLLSETTQGMHNLFRLSSKASMEGYYFKPRM
DRELLQTYSKGLIATTGCPSGEVQTRLRLGQYEAARAAAAEFQDIFGKDNYFAEIMDHGL
SIERRVMSDLLKLSKDLDIPLLGTNDLHYTHQHDATSHAALLCVQSGSTLDDPKRFKFDG
DGYYVKSPAEMRQVFRDHPEACDNTLLIAERCEVEFDTSANYMPRFPVPEGETEGSWMIK
EVENGLNDRYPDGIPDAVRKQAEYETDVILQMGFPGYFLVVADFINWAKRNGIRVGPGRG
SGAGSMVAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIQYVTEKYG
DERVAQIVTYGTIKAKQALKDAGRVLGFPFSMGDKLTKAMPPAVMGKDMPLDGMFNPEHP
RYKEASEFRTLIETDAEAKTVFDTALGLENLKRQWGVHAAGVIMSSEPLIDIIPIMRREQ
DGQIVTQFDYPACESLGLIKMDFLGLRNLTIINDALDNIEANRGHPLVLEELELDDPASY
ELLARGDTLGVFQLDGGPMRSLLRLMRPDNFEDISAVLALYRPGPMGVNSHINYALRKNK
QQEIEPIHPELEEPLADILDTTYGLIVYQEQVMAVAQRVAGYTLGQADLLRRAMGKKKKS
ELDKQKEIFFGGMTERGFGDVAQQTLWKVLESFADYAFNKAHTAAYGLVSYWTAYLKAHY
PAEYMAALLTSVGDSKDKMAVYLNECRRMGIKVLPPDVNESIRYFAAVGEDIRFGLGAVR
NVGTNVVEGIVASRQDVKYTSFHDFLAKVPAHAANKRTVESLIKAGAFDSLGSTRRALIE
VHEDACEGAVIDKKREANGEVGFDFDSLWDEPQQVVKVPERPEWTKKDKLAFEREMLGLY
VSDHPLAGLEVPLAKHASTSIHDLLASEDVQDGDQVTVAGLLTSVQHRVAKQSGNPYGMV
TVEDFNGEVTVMFMGKTYAEFAPALVADSIMVVRGRVSRRDDGLNLHAQSAFAPDLEGLD
ETGGLTLVVPEQRANEALVGELAQMLRRHAGSTEVQLKLHKGGTAKVFEVPMPVRVTADL
FGELKGLLGPNCLG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggcgcggcgcgcatcggtccgatggtccaagaggccgtcaaacagggcatg
cccgcgatcgccgtgaccgaccacggcaacaccttcgcggcgtacgagttctataagacc
gcgaaagacgccggcatcaagccgatcatcggcatcgaggcctacgtcacccccggaacc
caccgctccgacaagacccgcgtgcgctggggcacccccgagcagcagagcgacgacgtg
tcgggttcgggcgcgtacacccacatgacgctgctgtccgagacgacgcagggcatgcac
aacctgttccgcctgtcgtccaaggcgagcatggagggctactacttcaagccccgcatg
gaccgcgaactgctgcagacctacagcaagggcctgatcgcgacgaccggttgcccctcg
ggcgaggtgcagacgcgcctgcgcctcgggcagtacgaggccgcgcgcgccgcggcggcg
gagttccaggacatcttcggcaaagacaactacttcgccgagatcatggaccacgggctg
tcgatcgaacgccgggtcatgagcgacctgctcaagttgtcgaaagacctcgacatcccg
ctcctcggcacgaacgacctccactacacgcaccagcacgacgcgaccagtcacgcggcg
ctgctctgcgtgcagtcgggttcgaccctcgacgatccgaagcgcttcaagttcgacgga
gacggctactacgtcaagtcgcccgccgagatgcggcaggtcttccgcgaccatcccgag
gcctgcgacaacaccctgctgatcgccgagcgctgcgaggtcgagttcgacacctcggcc
aactacatgccccgcttccccgtccccgagggcgagaccgagggcagctggatgatcaaa
gaggtcgagaacggcctgaacgaccgctatcccgacggcatcccggatgccgtgcgcaag
caggccgagtacgagaccgacgtcatcctgcagatggggttcccgggctacttcctcgtc
gtcgccgacttcatcaactgggccaagcgcaacggcatccgcgtcggacccggtcgcggt
tcgggtgccggctcgatggtcgcctacgcgatgaagatcaccgacctcgaccccctgcag
cacggtctcatcttcgagcgcttcctcaaccccgaccgcgtctccatgcccgacttcgac
gtcgacttcgacgaccgtcgtcgtggcgaggtcatccagtacgtcaccgagaagtacggc
gacgagcgcgtcgcgcagatcgtgacgtacggcaccatcaaggccaagcaggcgctcaaa
gacgccggccgtgtgctcggcttccccttcagcatgggcgacaagctcaccaaggccatg
ccgcccgcggtgatgggcaaggacatgccgctcgacggcatgttcaaccccgagcacccg
cgctacaaagaggcgagcgagttccgcacgctcatcgagaccgacgccgaggccaagacg
gtgttcgacacggcgctcggtctcgagaacctcaagcgccagtggggcgtgcacgcggcc
ggtgtgatcatgtcgagcgagccgctgatcgacatcatcccgatcatgcgccgcgagcag
gacggtcagatcgtcacgcagttcgactacccggcctgcgagtcgctcggcctgatcaag
atggacttcctggggttgcgcaacctcacgatcatcaacgacgcgctcgacaacatcgag
gccaaccgcggccaccccctcgtgctcgaggagctcgagctcgacgaccccgcgtcgtac
gagctgctcgctcgcggcgacacgctgggcgtgttccagctcgacggcgggccgatgcgc
tcgcttctgcgcctgatgcgccccgacaacttcgaggacatctcggcagtgctcgcgctg
taccgcccgggccccatgggcgtgaactcgcacatcaactacgcgctgcgaaagaacaag
cagcaggagatcgagccgatccaccccgagctcgaagagccgctggccgacatcctcgac
accacctacggcctcatcgtctaccaggagcaggtgatggccgtcgcccagcgcgtcgcc
ggatacaccctcggccaagccgacctgctgcgccgcgcgatgggcaagaagaagaagagc
gagctcgacaagcagaaagagatcttcttcggcggcatgaccgagcgcggcttcggcgac
gtcgcgcagcagacgctgtggaaggtgctcgagtcgttcgccgactacgccttcaacaag
gcgcacaccgcggcctacggtctcgtgtcgtactggacggcctacctcaaggcgcactac
ccggccgaatacatggccgccctgctcaccagcgtcggcgactccaaagacaagatggcg
gtgtacctcaacgagtgccgccgcatgggcatcaaggtgctgccgcccgacgtcaacgag
tcgatccggtacttcgctgccgtcggcgaagacatccgtttcggcctcggcgccgtccgc
aacgtgggcaccaacgtcgtcgaggggatcgtcgcgtcacggcaggacgtcaagtacacg
tcgttccacgacttcctcgcgaaggttcccgcgcacgcggcgaacaagcgcaccgtggag
tccctcatcaaggcgggggcgttcgactcgctcggatccacgcgtcgcgcgctcatcgag
gtgcacgaagacgcctgcgagggcgccgtgatcgacaagaagcgcgaggcgaacggcgag
gtcggcttcgacttcgactcgctgtgggacgaaccgcaacaggtcgtcaaggtgcccgag
cgacccgagtggaccaagaaggacaagctcgcgttcgagcgcgagatgctcggcctctac
gtctccgaccaccctctggcgggtctcgaggtgccgttggcgaagcacgcgtccacctcc
atccacgatctgctggcgtccgaagacgtgcaggacggcgatcaggtgaccgtggcgggt
ctgctcacgagcgtgcagcaccgcgtcgccaagcagagcggcaatccctacggcatggtc
accgtcgaggacttcaacggcgaggtgaccgtgatgttcatgggcaagacctacgccgag
ttcgccccggcgttggtcgccgactcgatcatggtcgtgcgcgggcgcgtgtcgcgtcga
gacgacgggctgaatctgcacgcccagagcgctttcgcccccgatctcgaaggactcgac
gagaccgggggactcacgctggtcgtccccgagcagcgggccaacgaagcgctcgtcggc
gagctcgcgcagatgctccgtcgccacgccggctcgaccgaggtgcagctcaagctccac
aagggcggcacggcgaaggtcttcgaagtgccgatgcccgtgcgcgtgacggccgacctc
ttcggagagctcaagggcctgctcggccccaactgcctcggctga
DBGET
integrated database retrieval system
