Microbacterium sp. che218: CHE218_10710
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Entry
CHE218_10710 CDS
T10698
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
micm Microbacterium sp. che218
Brite
KEGG Orthology (KO) [BR:
micm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micm03016
]
CHE218_10710 (truB)
Enzymes [BR:
micm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHE218_10710 (truB)
Transfer RNA biogenesis [BR:
micm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHE218_10710 (truB)
Prokaryotic type
CHE218_10710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BFM24029
LinkDB
All DBs
Position
complement(1126090..1126983)
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AA seq
297 aa
AA seq
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MVRPGILLVDKPGGITSHDVVSRARRALGTRKIGHAGTLDPMATGLLVLGVEGATRLLTY
IVGADKTYEATILLGVATDSDDADGVETARADAADVAAVTDEAIAAGIAALTGAIEQVPS
TVSAIKVAGRRAYDLARAGEEVELKARSVTVSRFEVRETRRGEGTIELDVVVDCTSGTYI
RALARDLGRAVRVGGHLTALRRTRIGAFDVSAAASVDDIAEDALVAPATAAAVVMSVLAV
GADEARDLRHGKRIDGGGRLTGAVAAAIDPDGLLIGVVEKRGTQVKSVMNMPVEAAR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtcccggaatcctcctggtcgacaagcccggaggcatcaccagccatgacgtc
gtgtcgcgcgcgcggcgcgcgctcggcacccgcaagatcggccacgccggcacgctcgac
ccgatggcgacgggcctgctcgtgctcggcgtcgagggagcgacgcggcttctgacctac
atcgtcggcgccgacaagacctacgaggcgaccatcctgctcggagtcgccaccgacagc
gacgacgccgacggcgtcgaaacggccagggcggatgccgctgacgtcgccgccgtgacc
gacgaggccatcgccgccggcatcgccgccctgaccggtgcgatcgaacaggtgcccagc
accgtctcggccatcaaggtcgcgggccgccgcgcctacgacctcgcgcgcgccggcgaa
gaggtcgagctgaaggcgcggagcgtcacggtgtcgcggttcgaggtgcgcgagacgcgc
cgcggcgagggcacgatcgagctcgacgtggtcgtcgactgcacgagtggcacgtacatc
cgcgccctggctcgcgacctcgggcgcgcggtgcgggtcgggggacacctgacggcgctg
cgacgcacgcgcatcggggcgttcgacgtgtccgccgcagcctccgtcgacgacatcgcc
gaagacgccctcgtcgcgccggcgactgccgcggccgtcgtcatgagcgtcctcgcggtg
ggtgccgacgaagcacgcgacctgcggcacggcaagcgcatcgacggcggcggtcgcctg
actggagccgtcgccgccgcgatcgaccccgacgggctcctgatcggcgtggtcgagaaa
cgcggcacgcaggtgaagagcgtcatgaacatgcctgtggaggccgcccgatga
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