Microbacterium sp. che218: CHE218_14390
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Entry
CHE218_14390 CDS
T10698
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micm Microbacterium sp. che218
Pathway
micm03420
Nucleotide excision repair
micm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHE218_14390 (pcrA)
03430 Mismatch repair
CHE218_14390 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micm03400
]
CHE218_14390 (pcrA)
Enzymes [BR:
micm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHE218_14390 (pcrA)
DNA repair and recombination proteins [BR:
micm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHE218_14390 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CHE218_14390 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_22
ATP-synt_ab
EcoR124_C
FWWh
DEAD
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BFM24397
LinkDB
All DBs
Position
complement(1537966..1540401)
Genome browser
AA seq
811 aa
AA seq
DB search
MTDASTPLIFDGPAPSSARPDADLLEGLNGPQREAVTYRGQALLIVAGAGSGKTSVLTRR
IASLLRTREAYPSQILAITFTNKAAGEMRERVHQLIGQKADGMWISTFHSACVRILRREA
EQFGFTKSFTIYDSGDSRALIKRLVKEHEGDSFGLTPAGTQSRISKLKNELADAESYARS
ANMSDPAERVFVEIFGSYQRELQRANAFDFDDLIAQTVYLFRAFPQVADRYRKRFRHILV
DEYQDTNHAQYALIHELTRAPGADAEPFSSGGMMIFDAEPAGEDAASLTVVGDSDQSIYA
FRGADIRNISEFERDYPGAKVVLLEQNYRSTQNILSAANAVISNNFDRKDKKLWTDVGAG
DPIIGFTGYSQHDEAQFVADEIEALHKKGLPYSGVAVFYRTNSQSRALEEIFIRSAVPYK
IMGGTKFYERAEIKDALAYLIAVANPADSMALRRILNRPRRGIGDVTETAIARYAAEHGI
TFRDALANSAQIGVGPKLQKAIDQLDAVLSEATAVMLPASGELAPSTSVTEGLTLLLNKS
GYFDALRASKDPQDEARLENLDELVAVTREFARNNPEGTIIDFLTEVTLVADADDLDDAS
GSVSLMTLHTAKGLEYDAVFLTGVEEDLLPHRISANEPGGPQEERRLFYVGITRARKRLH
VSLAMTRAQFGEVTVAMPSRFLQEIPADLIDWRQSPGDVNGRGGSQSRALNARGRRPGQP
GAGGNRYGDDLVPLPKRAPADPSKFPNRIPAKVRDNGDMELASGDRIRHDDFGEGRVDAV
TGEGAKRVAHVRFDSVGPKKLLIKIAPITKL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgcctccacgccactcatcttcgacggccccgcgccgtcgtcggcccgtccc
gacgccgacctgctcgagggactgaacggcccgcagcgcgaggccgtcacctatcgcggg
caggcgctgctgatcgtcgcgggcgcgggttcgggcaagacgagtgtgctcacgcgtcgc
atcgcgtcgctgctgcgcacgcgtgaggcgtatccgagtcagatcctcgcgatcaccttc
accaacaaggccgccggcgagatgcgcgagcgcgtgcaccagctcatcgggcagaaggcc
gacggcatgtggatctcgacgttccactcggcgtgcgtgcgcattctgcggcgcgaggcc
gagcagttcggcttcaccaagtcgttcacgatctacgactccggcgactctcgtgcgctc
atcaagcgactcgtcaaagagcacgagggcgactcgttcggcctcaccccggccggcacg
cagagccgcatctcgaagctcaagaacgagctggcggatgccgagtcgtacgcccgatcc
gcgaacatgagcgaccccgccgagcgcgtgttcgtcgagatcttcggctcgtaccagcgt
gagctgcagcgggccaacgcgttcgacttcgacgacctcatcgcgcagacggtctacctc
ttccgcgcgtttccgcaggtcgccgaccgctatcggaagcggttccggcacatcctggtc
gacgagtaccaggacacaaaccacgcgcagtacgcgctcatccatgagctcacccgggca
ccgggggcggatgccgagccgttctcgtcgggcggcatgatgatcttcgacgcggagccc
gcgggtgaagacgccgcttcgctgaccgtcgtcggtgactccgaccagtcgatctacgcg
ttccgcggtgccgacatccgcaacatcagcgagttcgagcgcgattacccgggcgccaag
gtcgtgctgctcgagcagaactaccggtcgacgcagaacatcctctcggctgcgaacgcg
gtcatctcgaacaacttcgaccgcaaagacaagaagctgtggaccgacgtcggcgcgggc
gaccccatcattggcttcaccggttactcgcagcacgacgaggcgcagttcgtcgccgac
gagatcgaggcgctgcacaagaaggggctgccgtactccggggtcgcggtgttctaccgc
accaactcgcagtcccgtgcgctggaagagattttcatccgctccgcggtgccctacaag
atcatgggcggcaccaagttctacgagcgcgccgagatcaaagacgcgctcgcgtacctc
atcgccgtcgcgaaccccgccgactcgatggcgctgcgccgcatcctcaaccgtccgcgc
cgtggcatcggcgacgtcaccgagacggcgatcgcccgctacgccgccgagcacggcatc
accttccgcgacgccctcgccaactcggcccagatcggcgtcgggccgaagctgcagaag
gccatcgaccaactcgacgcggtgctgagcgaggctacggcggtcatgctcccggcatcc
ggagagctcgccccctccacctcggtcaccgagggcctcacgctgctgctgaacaagagc
ggctacttcgatgccctccgcgccagcaaagacccgcaagacgaggcgcgcctcgagaac
ctcgacgaactcgtcgccgtgacccgcgagttcgcgcgcaacaaccccgagggcacgatc
atcgacttcttgaccgaggtcaccctcgtggcagacgccgacgacctcgacgacgcgtcg
ggatccgtgtcgctcatgacgctgcacaccgcgaagggcctcgaatacgacgcggtcttc
ctcaccggtgtcgaagaagacctgttgccgcaccgcatctcggccaacgagcccggcggt
ccgcaggaggagcgacggttgttctacgtcggcatcacccgtgctcgcaagcgcctgcac
gtctcgctcgcgatgacccgcgcgcagttcggcgaggtgacggtcgcgatgcccagccgg
ttcctgcaggagatcccggccgacctcatcgactggaggcagtctcccggcgacgtgaac
ggtcgcggaggctcgcagtcacgcgcgctcaacgcccgcggtcggcgtcccggccagccc
ggggccgggggcaaccgttacggggacgacctggtgccgctgcccaagcgcgcgccggcg
gatccgagcaagttccccaaccgcatcccggcgaaggtgcgcgacaacggcgacatggag
ctcgcgtccggcgaccgcatccgccacgacgacttcggcgagggccgcgtcgatgccgtg
accggcgaaggcgcgaagcgcgtcgcgcacgtgcggttcgactcggtcgggccgaagaag
ctgctcatcaagatcgcgccgatcaccaagctctga
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