Microbacterium sp. che218: CHE218_17950
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Entry
CHE218_17950 CDS
T10698
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
micm Microbacterium sp. che218
Brite
KEGG Orthology (KO) [BR:
micm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micm03032
]
CHE218_17950
03400 DNA repair and recombination proteins [BR:
micm03400
]
CHE218_17950
Enzymes [BR:
micm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHE218_17950
DNA replication proteins [BR:
micm03032
]
Prokaryotic type
DNA Topoisomerases
CHE218_17950
DNA repair and recombination proteins [BR:
micm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHE218_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BFM24753
LinkDB
All DBs
Position
complement(1912102..1913073)
Genome browser
AA seq
323 aa
AA seq
DB search
MARLIRVRPYEDPGYRRVRSGSGFRFVDHTGASVPERDAERARGLVIPPAWREVWIAKEP
NAHIQAVGTDEAGRRQYTYHADWSKRQDKGKFARALQLAEALPRARSRVTQSLRRAEADR
ERVLAVSFRFLDLVAPRVGNARYFVTNGSRGLTTLQRRDATVDGDLIRLSFPAKSGKRAE
LSLRDAEFAAIVEELAFGRPRAALLTFKRGRRRVPLTPGDVNGYVRSLTGGPFSAKDFRT
LRGTILAAESLAKVGAVGGKNERKKAEVAAVRATAEALGNTPAVARASYIDPRVFSLYRK
GRTMELGGSKDAAIRRLILGERP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactgatccgcgtccggccctacgaggacccgggctaccggcgcgtgcgttcc
ggctcggggttccgcttcgtcgaccacaccggagcctcggtgcccgagcgcgacgcggag
cgcgctcgcggcctggtcattccgcccgcgtggcgcgaggtgtggatcgcgaaggagccg
aacgcgcacatccaggccgtcggcaccgacgaggcggggcgacggcagtacacctatcac
gcggactggtcgaagagacaggacaagggcaagttcgcccgagcgctgcaactggccgag
gcgcttccgcgggcgcgctcccgggtgacgcagtcgctccgacgggccgaggccgatcgc
gaacgcgtgctggcggtgtcgttccgcttcctcgacctcgtggcgccgcgcgtcggcaac
gcgcgctacttcgtcaccaacggcagccgcggcctgacgaccctgcagcgccgggatgcg
accgtcgacggcgacctcatccgtctgtcgttcccggccaagagcggcaagcgggcggag
ctgtctctgcgcgacgcggagttcgccgccatcgtcgaagaactcgcgttcgggcgtccg
cgtgcggcactgctgaccttcaagcggggccggcggcgcgtgccgctgacccccggcgac
gtcaacgggtacgtgcgctcgctcacgggcgggccgttcagcgcgaaggacttccggacg
ctgcgcggaacgatcctcgcggcggagtccctcgcgaaggtcggcgccgtcggtggcaag
aacgagcgcaagaaggccgaggtcgccgccgtccgcgcgaccgcagaggccttgggcaac
acccccgccgtggcgcgggcgagctacatcgacccgcgcgtgttctcgctgtaccgcaag
ggccgcacgatggagctcggcggctcgaaggacgccgccatccggcggctgatcctgggg
gagcgaccctga
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