KEGG   Microbacterium sp. che218: CHE218_22060
Entry
CHE218_22060      CDS       T10698                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
micm  Microbacterium sp. che218
Brite
KEGG Orthology (KO) [BR:micm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:micm03032]
    CHE218_22060
   03036 Chromosome and associated proteins [BR:micm03036]
    CHE218_22060
   03400 DNA repair and recombination proteins [BR:micm03400]
    CHE218_22060
DNA replication proteins [BR:micm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CHE218_22060
Chromosome and associated proteins [BR:micm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CHE218_22060
DNA repair and recombination proteins [BR:micm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CHE218_22060
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF937 HU-CCDC81_euk_2 PSF3_N
Other DBs
NCBI-ProteinID: BFM25164
LinkDB
Position
2327330..2327617
AA seq 95 aa
MADKSITKTELVASIASATGQSQSAVSGVLDSLFSTVSEAVAKGSKVSIPGWIAFEQVAT
SARTGRNPQTGEEISIPAGKRVKVTAGSKLKAAVK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggccgacaagtccatcaccaagaccgagctcgtcgcgagcatcgccagcgcgaccggg
cagagccagtccgccgtgtcgggcgtgctcgactccctcttctccaccgtctccgaggcg
gtcgccaagggcagcaaggtctcgatccccggttggatcgccttcgagcaggtcgcgacc
tcggcgcgcaccggccgcaacccgcagacgggtgaggagatctccatccccgccggcaag
cgcgtcaaggtgaccgctggctccaagctcaaggccgccgtcaagtaa

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