Microbacterium sp. che218: CHE218_28460
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Entry
CHE218_28460 CDS
T10698
Symbol
pdxR
Name
(GenBank) pyridoxine biosynthesis transcriptional regulator PdxR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
micm Microbacterium sp. che218
Brite
KEGG Orthology (KO) [BR:
micm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
micm03000
]
CHE218_28460 (pdxR)
Transcription factors [BR:
micm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CHE218_28460 (pdxR)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
DUF6716
HTH_36
HTH_41
Motif
Other DBs
NCBI-ProteinID:
BFM25804
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Position
3013655..3015061
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AA seq
468 aa
AA seq
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MIDVGILDRGAPAPLHEQLAHGLRASILAGRVTSGEAIPSTRALAADLGLARGTVVSAYE
ILTGEGYLVARPGGGTVVAEIVRPSEPRSLPAVAAAPVPTPPVIDLRPGRPGTAGIVDAA
WRSAWRRASALEVAADVADVLGDPTLRRQIAAHLGRTRGLDVAPDDVIVTAGTSDAMLLT
VLALEPRGARLRVGIENPGYPRVRHLLGRLGVEAVPIAVRLGAGLDLDDIEERDDLDAMI
VTPHHHYPFGSRLDAAARARLLAWAARTGAVVVEDDYDSEFPHGRVPLPPLHLLDPASVV
LIGSLSKVLTPALRCGWIVATGAWRERLAAARADLDPSVSQVQQAALALYLGDGALARHT
ARRRRDYRHRRRLMLEAFAGVEGVTLTATDGGLHAVVLLHGSAREAESRMVAALSARGIV
VAPLAGYAVPGTETELPPGVVFGYAEPSTPALMGAVETIIATARAATT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgtcggcatcctggaccgtggcgcccccgcgcccctgcacgagcagctcgcc
cacggcctgcgcgcctccatcctcgccggtcgagtgaccagcggcgaggcgatcccctcg
acgcgggcactggccgccgacctggggctcgctcgcggcacggtggtctcggcctacgag
atcctgacgggtgaggggtacctggtggctcggcccggcggcggcaccgtcgtcgccgag
atcgtgcgtccctccgagccgcggtctcttccggccgtcgcggccgcacccgtgcccacc
ccgcccgtcatcgacctgcgtccggggcggccggggacggcgggcatcgtcgacgccgca
tggcgctcggcatggcgacgcgcgagtgcgctcgaggtcgccgccgacgtggccgacgtg
ctcggcgatcccaccctgcggcggcagatcgccgcgcacctcggccgcacccgcgggctc
gacgtcgcccccgacgacgtcatcgtgacggcggggacgagcgatgcgatgctgctcacc
gtgctcgccctcgaaccccgcggggcgcggctgcgggtcggcatcgagaaccccgggtat
ccgcgcgtgcggcatctgctcggccgcttgggcgtcgaggcggtgccgatcgcggtgcga
ctcggcgcgggtctcgacctcgacgacatcgaggagcgcgacgacctcgacgcgatgatc
gtcaccccgcaccaccattacccgttcggcagtcggctggatgccgcggcccgggcccgt
ctgctcgcgtgggcggcccgcacgggagccgtcgtcgtcgaagacgactacgacagcgag
ttcccccacggccgcgtgccgctgccgcccttgcacctgctcgatcccgcgagcgtggtg
ctgatcggttcgctgtcgaaggtgctcaccccggcgctgcgctgcgggtggatcgtggcg
accggggcgtggcgcgaacgcctcgcagccgcgcgcgccgacctcgatccgtccgtctcg
caggtgcagcaggcggcgctggccctgtacctcggcgacggagccctcgctcggcacacc
gcccgacgccgccgcgactaccgccaccggcgccggctgatgctcgaagcgttcgccggt
gtcgagggcgtgacgctcacggccaccgacgggggactgcacgccgtcgtcctgctgcac
ggttccgcgcgcgaggcggaatcccgcatggtcgcggcgctctcggcccgcggcatcgtg
gtggcgcccctcgcgggatacgcggtgccgggaaccgagaccgaactgccgccgggcgtg
gtgttcgggtacgccgagccgtcgactcccgctctgatgggggcggtcgagacgatcatc
gcgaccgcccgcgcggcgacgacctag
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