Microbacterium sp. che218: CHE218_33200 Help Entry CHE218_33200      CDS       T10698                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism micm  Microbacterium sp. che218 Brite Enzymes [BR:micm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CHE218_33200 (hrpA) Messenger RNA biogenesis [BR:micm03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      CHE218_33200 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-ProteinID:  BFM26278 LinkDB All DBs Position complement(3510480..3514709) Genome browser AA seq 1409 aa AA seqDB search MSVEPVIVYPPELPVSAARDEIARAIRDHQVVIVAGATGSGKTTQLPKICLELGRTSIAH TQPRRIAARTIAERIAEEMQVPLGSTVGYKVRFTDKVSADTRVALVTDGILLNEIHRDRL LRRYDTIIVDEAHERSLNIDFLLGYLRRILPKRPDLKVIVTSATIDPESFARHFAAAPTE PGGEPTPAPVIEVSGRTYPVEIRYRPVDGADVVADDADDETPDAGTPAPQPKKPRSPARP AAKAGRSDDDADEVGAVVAALRELDREAPGDVLVFFPGEAEIRDAADAIRGAYQKDTSPT EVLPLYGRLSAAEQHRVFERSSVAGVRRRVILATNVAETSLTVPGIRYVVDTGTARISRY SNRSKIQRLPIEAVSQASAQQRSGRAGRTSPGIAIRLYSEDDFTRRPEYTEPEILRTSLA SVILQMLSLGFGDIQAFPFLTPPDSRGVKAAFDLLVELGAVKLPAPGSRGADASRERDVR DDADPSRQRGARGPREDGPRLTEIGREIARLPIDPRFARMLIEARRNDVSSEVLAIVSGM SIQDVRERPEERREEADRFHARFTDPTSDFLSLLNLWDYLQEKQAELGSSAFRRLCRSEH LNYVRVREWMDVHRQLRSLGGERSGEGGSRGSGDGGRRARNHVPPSAGSDPSKPHKSGHG ATKSGRGSKAADQNTAPEGHAAGDAIHRAILSGLLSHLGILDPRTMAQAKDRKAPGDARP TKGEYIGARGARFAIFPGSGLKKKRPSAVMAAELVETSRLFARTVAAVDPAWAEELAPDL VKRSLSEPHWSKDAGSAAAYEKVTLFGVELVGRRRVQLARFDRPLAREMFVRHALVEGEW DPSVLDKRLTAFLRRNQEQRRLLEKIEERERRRDILIGDEAVFAFYNSRIPADVTDVRSF ETWWKDASNRTPHLLDLRESDLTGNRAQGDDRAFPARWRQGDQTLNLAYRFEPGAPDDGV TVVVPLPLLAQLRPDGFDWQVPGMRDELVTALLRALPKTIRRNVVPAADWAEKFSAELAE KGPEHANGLPKTTLVDALAALVQRVANQRVSAADFELERVPGHLMPSFRAVDARGRAIGS DRDLATLQRRLADKARSSVESTIARPAQRAAKVAEASPAFASRSKLTTWDLDELTEVVDT PVAGGVVRGYPALVDEGDSVALRVEATPEDAARHTRAGIRRLLLLAVPSPATYVLDHLTA NEKLALAASPYQNAKALIEDARVALADDVLLREAPSGVVRTKADFERVRDAFSAASVDRT FQTVSLAAKILLAQREVDRAMKDASSITLLGALNDVRGQLKGLIFPGFLSRTGLARLQHL PRYLAGALDRVKTLSDNPGRDRQRMTEYERSAAGFVEAGGTVPLPADAPANLVQTRWLLE ELRVSLFAQRLGTAEPVSPQRIAKALKSA NT seq 4230 nt NT seq  +upstreamnt  +downstreamnt gtgtctgtcgaacccgtcatcgtctacccgcccgagctgcccgtcagcgccgcgcgggac gagatcgcgcgcgccatccgcgaccaccaggtcgtgatcgtcgccggggcgacgggctcg ggcaagaccacgcagctgcccaagatctgcctcgagctgggccgcacctcgatcgcgcac acccagccgcgccgcatcgccgcgcgcacgatcgccgagcgcatcgccgaagagatgcag gttccgctcggctcgaccgtcggctacaaggtgcgcttcaccgacaaggtgtcggccgat acgcgcgtggcgctggtgaccgacggcatcctgctcaacgagatccaccgcgaccggctg ctgcgccgctacgacacgatcatcgtcgacgaggcgcacgagcgctcgctcaacatcgac ttcctgctcggctacctgcgccggatcctgccgaagcgccccgacctcaaggtcatcgtc acctcggcgacgatcgaccccgagagcttcgcgcggcacttcgcggcggctcccaccgag ccgggcggcgagccgaccccggcgccggtcatcgaggtgtcgggccgcacgtatccggtc gagatccggtaccggccggtcgacggcgcggacgtggttgccgacgacgccgacgacgag accccggatgccgggaccccggcgccgcagccgaagaagccccgcagcccggcccggccg gccgccaaggcggggcgctccgacgacgacgccgacgaggtcggagccgtcgtcgccgcc ctgcgcgaactcgatcgcgaggccccgggcgacgtgctcgtcttcttccccggcgaggcc gagatccgcgatgcggcggatgccatccgcggggcgtaccagaaggacacctcgcccacc gaggtgctgcccctctacggacgcctctccgcggccgaacagcaccgcgtgttcgagcgc tcgagcgtcgcgggcgtgcgccgccgcgtcatcctcgccacgaacgtcgccgagacgagt ctcaccgtccccggcatccggtacgtcgtcgacaccggaaccgcccgcatctcgcgctac agcaaccggtcgaagatccagcgcctgccgatcgaggccgtgtcgcaggcctcggcgcag cagcgttccgggcgtgcggggcgcacctcgcccggcatcgcgatccggctctactccgaa gacgacttcacgcgtcgcccggagtacaccgaacccgagatcctgcggacgtcgctggca tccgtcatcctccagatgttgtcgctcggcttcggcgacatccaggccttcccgttcctc accccgcccgattcgcgaggggtgaaggcggcgttcgaccttctcgtcgagctcggcgcg gtgaagctgcccgctcccggttcgcgcggtgccgacgcctcgcgcgagcgcgacgtgcgc gacgacgccgacccgtctcggcagcgcggcgcgcgtggtccccgcgaggacggcccccgc ctcaccgagatcggacgcgagatcgcgcgcctgccgatcgacccgcgcttcgcccgcatg ctcatcgaggcgcgtcgcaacgacgtgtcgagcgaggtgctcgcgatcgtgtcgggcatg tcgatccaggacgtgcgcgaacggcccgaggagcgacgggaggaagccgaccgcttccat gcgcgcttcaccgaccccaccagcgacttcctctcccttctgaacctctgggactacctg caggagaagcaggccgagctcggctcgagcgcgttccggcgcctgtgccgcagcgagcac ctcaactacgtgcgcgtgcgcgagtggatggacgtccaccggcagctgcggtcgctcggc ggcgagcgctccggtgagggtggctcgcggggctcgggcgacggaggccgtcgcgcgcgg aaccatgtccccccttcggctggctccgacccctccaagccgcacaaatcgggacatggg gcgaccaaatcgggacgtggttcgaaagccgccgaccagaacaccgcccccgaggggcac gccgccggcgacgccatccaccgcgcgatcctctccgggttgctctcgcacctcggcatc ctggacccccgcacgatggcgcaggccaaagaccgcaaggcgccgggtgatgcccgcccc accaagggcgagtacatcggcgcgcgcggggcgcggttcgccatcttccccggctcgggc ctgaagaagaagcggccctcggcggtcatggccgccgagctcgtcgagacctcgcgcctg ttcgcccgtacggtcgccgccgtcgacccggcgtgggcggaggagctcgcccccgacctg gtcaagcgctccctcagcgagccgcactggtcgaaggatgccggctccgccgccgcctac gagaaggtcaccctcttcggcgtcgagctcgtcgggcgtcgccgggtgcagctcgcgcgc ttcgatcggccgctcgcacgcgagatgttcgtgcgccacgcgctggtggagggcgagtgg gacccctcggtgctcgacaagcgcctcaccgcgttcctccgccgcaaccaggagcagcgc cgcctgctcgagaagatcgaggagcgcgagcgtcgccgcgacatcctgatcggcgacgag gccgtcttcgcgttctacaactcgcgcatcccggccgacgtcaccgacgtgcgctcgttc gagacgtggtggaaggacgcctcgaaccgcaccccgcacctgctcgacctgcgcgagtcc gacctcaccggcaaccgcgcccagggagacgaccgggccttccccgcgcgctggcggcag ggcgatcagaccctcaacctcgcgtaccgcttcgaaccgggagcccccgacgacggcgtg acggtggtcgtgccgctgccgctgctcgcgcagctgcgccccgacggcttcgactggcag gttccgggcatgcgcgacgagctcgtcaccgctctgctgcgcgcgctgccgaagaccatc cgccgcaacgtcgtgcccgccgccgactgggcggagaagttctcggccgagctcgccgag aagggccccgagcacgcaaacggtctgccgaagacgacgctcgtcgacgccctcgccgcc ctcgtgcagcgcgtcgcgaatcagcgggtgagcgccgccgacttcgagctcgagcgggtt cccggccacctcatgccgtcgttccgcgccgtcgacgcacgcggccgagcgatcggcagc gaccgcgacctggcgaccctgcagcgccgtctcgccgacaaggcccgctccagcgtggag tcgacgatcgcgcgcccggcgcagagagccgcgaaggtcgccgaggcctcccccgccttc gcctcgcgctcgaagctgacgacctgggatctcgatgagctcaccgaggtcgtcgacacc ccggtcgccggcggtgtcgtgcgcggctaccccgccctggtcgatgagggagacagtgtc gccttgcgcgtggaggcgacacccgaagacgcggcgcggcacacgcgtgccggcatccgt cgtctcctgctgctggccgtcccctcgcccgcgacgtacgtgctcgaccacctcacggcg aacgagaagctcgccctcgcggcctcgccgtaccagaacgccaaggcgctcatcgaggat gcccgcgtggccctcgccgacgacgtgctgctgcgcgaggcgccgagcggcgtcgtgcgc acgaaggccgacttcgaacgcgtgcgcgacgccttctccgcggcatccgtcgaccgcacc ttccagacggtgtcgctcgcggcgaagatcctgctcgcgcagcgcgaggtcgaccgcgcg atgaaggacgcctcatccatcacgctgctcggcgcgctgaacgacgtgcgcgggcagctg aagggactgatcttcccgggattcctctcgcgcacgggcctcgcgcggctgcagcacctg ccgcggtatctggccggagccctcgaccgcgtcaagacgctgtccgacaaccccggccgc gaccgccagcgcatgaccgagtacgagcgctccgccgcgggcttcgtcgaagccggcggg accgttccgctgccggccgacgcccccgcgaacctcgtgcagacccgctggctgctcgaa gaactgcgcgtgagcctgttcgcccagcgcctcggcacggccgagccggtgtcgccgcag cgcatcgcgaaggcgctcaagagcgcgtga

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