Micromonospora sp. SH-82: WHN02_04205
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Entry
WHN02_04205 CDS
T11153
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
micn Micromonospora sp. SH-82
Pathway
micn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WHN02_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micn03400
]
WHN02_04205
Enzymes [BR:
micn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WHN02_04205
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WHN02_04205
DNA repair and recombination proteins [BR:
micn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WHN02_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XXG08547
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Position
907645..908505
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AA seq
286 aa
AA seq
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MPELPEVEALAGYLRQRTVGRRVDRLDVAAVSALKTYDPPTTAVAGRTVVDARRHGKFLD
VVVDGDLHLVVHLARAGWLHYREGFPSAAPLRPGKGPIALRVRLDDGSGFDLTEAGTQKS
LAVYLVTDPAQVPGVARLGPDALSVDQSVFAERIRSRRGQVKGVLTDQQVLAGVGNAYSD
EILHAAKLSPFALTDRLTDEQLTTLHAATRRVLTEAVQRSVGQRAAELKSEKRSGLQVHA
RTGLPCPVCGDTVREVSFSGSSLQYCPACQTDGRTLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactaccagaggtggaggcgctcgccggctacctgcgacaacgcactgtgggg
cggcgtgtcgaccggctggacgtggcggccgtcagcgccctgaagacgtacgacccgccg
acgaccgcggtggccggtcgtaccgtcgtcgacgcccgacggcacggcaagttcctggac
gtggtcgtcgacggggacctgcacctggtggtgcacctggcccgggccgggtggctgcac
taccgggaggggttcccctccgccgcacccctgcgccccgggaaggggccgatcgccctg
cgggtacgcctcgacgacggctccggtttcgacctgaccgaggcgggcacccagaagagc
ctcgccgtctacctggtgaccgatcccgcccaggtgccgggggtggcccggctggggccg
gacgccctgtcggtggaccagtccgtcttcgccgagcggatccggagccgccgagggcag
gtcaagggggtgttgaccgaccagcaggtgctggccggggtcggcaacgcgtactcagac
gagatcctgcacgccgcgaagctctcgccgttcgccctcaccgaccggctgaccgacgag
cagctgaccaccctgcacgccgcgacccgtcgggtgttgaccgaggcggtgcagcgttcg
gtgggccagcgggcggcggagctgaagtcggagaagcggtccgggttgcaggtgcacgcc
cggaccggcctgccgtgtccggtctgtggggacaccgtgcgcgaggtctccttcagtggt
tccagcctccagtactgccccgcctgccagaccgacggccggacgctcgctgaccgcagg
ttgtcccgacttgtacggtga
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