Micromonospora sp. SH-82: WHN02_13200
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Entry
WHN02_13200 CDS
T11153
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
micn Micromonospora sp. SH-82
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micn03021
]
WHN02_13200
Transcription machinery [BR:
micn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WHN02_13200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
MarR
HTH_23
HTH_3
DUF7343
GerE
Sigma70_ECF
DUF134
HTH_24
HTH_10
HTH_31
NirdL-like_HTH
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
XXG10138
LinkDB
All DBs
Position
complement(2885330..2886157)
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AA seq
275 aa
AA seq
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MTAPTITEQATPAPSAATEKLDPRALTDSASDILNAMAALPAGHPSRAAMRDRAIEAWLP
LANHLAHRYSGRGEPTDDLAQTAAVGLIKAIDKFDPTRGVDFAGYAIPTIIGELKRHFRD
RTWDIRVPRRLQELRLAISDANSSLLQTLGRSPTVADIAAHLKLTEEEVLEGLEGARAYN
AVSLSTPTGDGERATELGDMLGGEDGEFELAELRVALGPALATLDEREQKILTLRFYGNL
TQSQIADQIGVSQMHVSRLLARALTKLRGQLDGTY
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccaaccatcaccgagcaggcgacacccgccccctcggcggccaccgagaag
ctcgacccacgggcactcaccgacagcgccagcgacatcctcaacgcgatggccgccctc
ccggcgggccacccctcccgggcggccatgcgggaccgggcgatcgaggcgtggctgccg
ctggccaaccacctcgcccaccgctacagcgggcgcggggagccgaccgacgacctggcg
cagaccgccgccgtcggcctgatcaaggcgatcgacaagttcgacccgactcggggcgtc
gacttcgccgggtacgcgatccccaccatcatcggtgagctcaagcggcacttccgggac
cggacctgggacatccgggtgccccgtcgcctgcaggagctgcggctggcgatctccgac
gccaacagctcgctgttgcagaccctcggccggtcgccgacggtcgccgacatcgccgcg
cacctcaagctcaccgaggaagaggtcctggagggcctggagggcgcccgcgcgtacaac
gcggtgtcgctgtccaccccgaccggtgacggagagcgggccaccgagctgggcgacatg
ctcggcggcgaggacggcgagttcgagctggcggagctgcgggtcgcactcgggccggcg
ctggccaccctcgacgagcgcgagcagaagatcctcaccctgcggttctacggcaacctc
acccagtcgcagatcgccgaccagatcggcgtctcgcagatgcacgtctcccggctgctc
gcccgggcgctgaccaagcttcgcggtcagctcgacggcacctactag
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