Micromonospora sp. SH-82: WHN02_13360
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Entry
WHN02_13360 CDS
T11153
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
micn Micromonospora sp. SH-82
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micn03032
]
WHN02_13360
03400 DNA repair and recombination proteins [BR:
micn03400
]
WHN02_13360
Enzymes [BR:
micn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WHN02_13360
DNA replication proteins [BR:
micn03032
]
Prokaryotic type
DNA Topoisomerases
WHN02_13360
DNA repair and recombination proteins [BR:
micn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WHN02_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Hera_DD
Motif
Other DBs
NCBI-ProteinID:
XXG10169
LinkDB
All DBs
Position
2918398..2919381
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AA seq
327 aa
AA seq
DB search
MRLRRSDPGRPGYARIRRGRGWSFVAPGGDPVRDPGELDRLRDLVIPPAWQQVWISPYPN
GHIQAVGVDAAGRRQYLYHPQWRRRQDEAKFDHVLAVARRLPQLRDRVDRDLTGRGLSRS
RVLATVTRLLDMGMFRIGSDQYATGDDPTFGVATLRPEHARSRGGCVVFEFPAKGGLDQV
RQIEDPQLCRVLVDLRRRRRRADRLFGYWDGRSWRDVRSDEVNGYLREVSGAEMTAKDFR
TWHATVLAATHLATTGPQRSVTARRRAVAAVMRDVAELLGNTPTVARTSYVDPRVVDLYH
EGVVVPVEPGTPREGAERSVLDLLERA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgcggcgtagcgatccgggcagaccggggtacgcccggatccgccgcggccgg
ggctggtcgttcgtcgcccccggcggtgacccggtacgcgaccccggcgagctggaccgg
ctgcgggacctggtcatcccgccggcctggcagcaggtgtggatctcgccgtacccgaac
gggcacatccaggccgtcggggtggacgccgccgggcggaggcagtacctctaccacccg
cagtggcggcgcaggcaggacgaggcgaagttcgaccacgtcctggcggtggcccgtcgc
ctcccgcagctgcgggaccgggtcgaccgggatctgaccggccgggggctgagccgcagc
cgggtgctggccacggtgacccgtctgctcgacatggggatgttccggatcggcagcgac
cagtacgccaccggggacgacccgaccttcggggtggcgaccctgcgccccgaacacgcc
aggtcccggggcgggtgcgtggtcttcgagttcccggccaagggcggattggaccaggtc
cggcagatcgaggacccgcagctgtgccgggtcctggtggacctgcggcgacggcgtcga
cgggcggaccggctgttcggctactgggacggccgctcctggcgtgacgtgcgcagcgac
gaggtcaacggctacctgcgggaggtcagcggggcggagatgaccgccaaggacttccgt
acctggcacgcgacggtcctggccgcgacccacctggccaccaccggcccgcagcggtcg
gtcaccgcccgtcggcgggcggtggcggcggtgatgcgggacgtcgccgagctgctgggc
aacaccccgactgtggcccggacctcctacgtggaccctcgggtcgtcgacctctaccac
gagggtgtggtggtgccggtggaaccggggacgccccgggagggggcggagcggtcggtg
ttggacctgctcgaacgggcctga
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integrated database retrieval system
