Micromonospora sp. SH-82: WHN02_15650
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Entry
WHN02_15650 CDS
T11153
Name
(GenBank) cellulose binding domain-containing protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
micn Micromonospora sp. SH-82
Pathway
micn00040
Pentose and glucuronate interconversions
micn01100
Metabolic pathways
micn02020
Two-component system
micn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
WHN02_15650
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WHN02_15650
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WHN02_15650
Enzymes [BR:
micn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
WHN02_15650
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
WHN02_15650
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Gene cluster
GFIT
Motif
Pfam:
CBM_2
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XXG05657
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All DBs
Position
3425568..3426977
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AA seq
469 aa
AA seq
DB search
MSTGLRRRRLTAATLAACTAAMVTAGVVTAVSAQAAAGCQVGYRVTGQWQGGFTATITVK
NLGDAIDGWRLGWSFPAGQAVTQAWGFTAAPTRGAVVATNVDYNAAIPTNATIEVGFNGS
WNNSTNPAPSTFTLNGTTCTGSVAPTTGPATTPPTPTTPPPNPTTPPPTPGPGVPYSSTP
DGFAGAAGTTGGAGGTTVTVTNQADLERYATASAAHVIRIDRAITISPYGKEISVRSDKT
IVGVGRNGQIVNGGFFLGSGTSNVIIRNLTIRDTRVASDDPDDKDFDYDGIQMDTANRIW
IDHNHITRMNDGAIDSRKDTTNLTVSWNIISEANKTFGIGWTENVTARMTIHHNWFRDVN
SRVPSTDNVAYAHLYNNYLQNARSGNNSRGATRMVLENSYFERVTNPYYRDSGAQLRQSG
NVVVDSSGRRESGGSAFDPSSFYPYALHPAAQVPDLLRTHAGPQAAIGL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccggtttgcgacgacgacgtctgacggcggcgacgctcgccgcctgcaccgcg
gcgatggtcacggcgggcgtcgtcacggcggtgtccgcccaggcggcagcgggttgccag
gtgggctaccgggtgaccgggcagtggcagggcggcttcaccgccacgatcaccgtcaag
aacctgggcgacgcgatcgacgggtggcgactgggctggtccttccccgccggtcaggcc
gtcacccaggcctgggggttcaccgccgcccccacccgcggtgccgtcgtcgccacgaac
gtcgactacaacgccgccatccccaccaacgccaccatcgaggtggggttcaacgggtcc
tggaacaactccaccaaccccgccccgagcaccttcaccctcaacggcaccacctgcacg
ggatcggtggcccccaccaccggacccgccaccaccccgccgaccccgaccaccccgcca
ccgaatccgaccaccccgccaccgacccccgggccgggggtgccgtactccagcaccccg
gacgggttcgccggtgccgccgggaccaccgggggagcgggcggcaccaccgtcaccgtc
accaaccaggccgacctggagcggtacgccacggccagcgccgcccacgtcatccggatc
gaccgggccatcaccatcagcccgtacggcaaggagatctccgtccggtccgacaagacc
atcgtcggggtgggccgcaacggccagatcgtcaacggcgggttcttcctgggcagcggc
accagcaacgtcatcatccggaacctgaccatccgggacacccgggtggcctcggacgac
cctgacgacaaggacttcgactacgacggcatccagatggacaccgccaaccggatctgg
atcgaccacaaccacatcacccggatgaacgacggggcgatcgacagccggaaggacacc
accaacctgaccgtgtcctggaacatcatctccgaggcgaacaagaccttcgggatcggg
tggaccgagaacgtcaccgctcggatgaccatccaccacaactggttccgggacgtcaac
tcccgggtgcccagcaccgacaacgtggcctacgcccacctctacaacaactacctccag
aacgcccgctccgggaacaactcccggggcgccaccaggatggtgttggagaacagctac
ttcgaacgggtcaccaacccctactaccgggactcgggggcgcagctgcggcagagcggc
aacgtcgtggtcgacagcagcggacgacgggagtccggcggctcggccttcgacccgtcg
agcttctacccctacgccctgcacccggccgcccaggtgccggacctgctgcgtacccac
gccggaccccaggcggccatcggcctgtga
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