Micromonospora sp. SH-82: WHN02_20280
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Entry
WHN02_20280 CDS
T11153
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
micn Micromonospora sp. SH-82
Pathway
micn03030
DNA replication
micn03430
Mismatch repair
micn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WHN02_20280
03430 Mismatch repair
WHN02_20280
03440 Homologous recombination
WHN02_20280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micn03032
]
WHN02_20280
03400 DNA repair and recombination proteins [BR:
micn03400
]
WHN02_20280
Enzymes [BR:
micn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WHN02_20280
DNA replication proteins [BR:
micn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WHN02_20280
DNA repair and recombination proteins [BR:
micn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WHN02_20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XXG06514
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All DBs
Position
complement(4573886..4575535)
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AA seq
549 aa
AA seq
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MSIFIAGHLTRQPGTDPRTVTFAFVDVETTGTDPDSGARICEIAVVRMRGDGVVLDEYAT
LVDPGAPPPTGEPDPNPELDVTVAPTFPEIADDLLARLSGAIVVGHSLAFVDRFLSAEFD
RLGLALPPVPGLCAQVTARLHLDRDDDGLTELANLLTGEWPSALPSALGVARAMAGTLAT
LVGTAPEPLSWRGLAATSLPAQPRATPVTPRVVGLRKGSDGWLATLTARLPYTVDPPRPR
PDGLREYRAGLARALADGRIVGDEAMELADLAGRAGLTQSTAWQVHEEFLVVHRAHAESD
GVVTATELRELQRAAKELGATYLIRDLEEAAAASRARREAPLRGWRVLPVGDSPGVTAAV
DLAVEHGATVAVKLTKTVRLVITDSDAADPRLARAGTLGVPVLTAAQATTLIAEEVATPG
TDQAGSNGMDTGDGAHGPRWHEFWRPRELTPTEYRARFGETLTLPAGAPMAAARPTAAVT
TAVTVPISVDPAAAGRPAVGGSAAGRPAVGRASAVHTTTAHAKSGCAVVALLAGSLLVGA
VELVRNLVF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatcttcatcgccggccacctcacccggcagcccggaaccgacccacggaccgtc
accttcgccttcgtggacgtcgagacaaccggcaccgacccggacagcggggcccggatc
tgcgagatcgccgtggtccggatgcgcggcgacggcgtcgtcctggacgagtacgcgaca
cttgtcgaccccggggcgccgcccccgaccggcgaacccgacccgaaccccgaactggac
gtcaccgtcgcgccgaccttcccggagatcgccgacgacctcctggcccggctcagcggg
gcgatagtggtgggccacagcctggccttcgtcgacaggttcctcagcgccgagttcgac
cgcctcggcctcgccctgcccccggtccccgggctctgcgcccaggtcaccgcccgactc
cacctcgatcgggacgacgacgggctgacggagctggcgaacctcctcaccggggagtgg
cccagcgcgctgccctccgccctcggcgtcgcccgcgccatggccggtacgctcgccacc
ctcgtcggcaccgcccccgaaccactgtcctggcggggcctggcggccacctcgctaccg
gcgcagccccgggcgacgcctgtcaccccccgggtggtgggcctgcgcaagggcagcgac
gggtggctcgccaccctgaccgcccgactcccgtacacggtggatccgccccgaccgcga
ccggacgggctgcgcgagtatcgggcggggctcgcccgggccctcgccgacggccgaatc
gtcggcgacgaggcgatggaactcgcggacctcgccggtcgggccgggctcacccagtcg
acggcctggcaggtgcacgaggagttcctcgtcgtgcaccgcgcccacgccgagtccgac
ggcgtcgtcaccgccaccgagctgcgggaacttcaacgagcggcgaaggaactcggggcg
acgtacctgatccgggacctggaggaggcggcggcggccagccgggcccggcgcgaggcc
ccgctgcgggggtggcgggtcctgcccgtcggcgactcgccgggggtgaccgccgccgtg
gacctcgccgtcgagcacggggccaccgtggcggtgaagctcaccaagaccgtccggctg
gtgatcaccgacagcgacgccgccgacccccgcctcgcccgggcgggcaccctgggcgta
ccggtcctgacggccgcgcaggccaccaccctgatcgccgaggaggtcgccacccccggc
accgaccaggccgggtcgaacgggatggacaccggcgacggcgcgcacggcccccggtgg
cacgagttctggcgaccccgggaactgaccccgacggagtaccgcgcccggttcggcgag
acgctcaccctccccgccggtgccccgatggccgccgcccggccgaccgctgctgtcacc
accgccgtcaccgtcccgatctccgtcgacccggcagccgccggtcggcccgccgtcggg
ggttctgccgccgggcgtcccgccgtcggtcgggcgtcggcggtccacaccaccaccgcg
cacgccaagagcgggtgcgccgtggtagcgctgctcgccggttcactcctggtcggcgcc
gtcgagctggtacggaacctggtcttctga
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