Micromonospora sp. SH-82: WHN02_23990
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Entry
WHN02_23990 CDS
T11153
Name
(GenBank) cellulose binding domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
micn Micromonospora sp. SH-82
Brite
KEGG Orthology (KO) [BR:
micn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
WHN02_23990
Enzymes [BR:
micn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
WHN02_23990
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GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP_3
FG-GAP
PQQ
Motif
Other DBs
NCBI-ProteinID:
XXG10632
LinkDB
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Position
complement(5494621..5496855)
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AA seq
744 aa
AA seq
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MVAGTTAALLVAGGLTAATASADAPGCRIDYRVTNQWSGGFGADVTITNLGDPVDGWTLT
WSFTAGQQVAQAWNATVTSTGAQVTARDVGYNAVIGTGGTAAFGFNGSWTGSNPVPASFA
LNGTTCTGATTPTTGPPTTPPPTTPPPTTPPPTTGPPPNPPAGAKQMERLDRGLVSVRSG
NGNLVSWRLLGTETTGVSFNLYRGTTRVNTTPITGATNHLDNGAAAGTTYTVRAVVGGVE
QPASPPALQFGNGYLDVPIQPPAGGTTPSGEAYTYTANDAGTGDLDGDGRYDLVVKWDPT
NAKDNAQSGYTGNVYVDAYTLTGNRLWRIDLGRNIRAGAHYTQFQVYDYDGDGDAEVAMK
TADGTRSGTGQTIGNGSADHRNSSGYVLAGPEYLTMFDGRTGAVASTVTYDPPRGNVSSW
GDNYGNRVDRFLAGTAYLDGQRPSLIMARGYYTRAVVAAWDFRNGTLTKRWTFDSATSGN
GAAHGQGNHSLSVADVDADGRQEIVYGAATIDDNGRLLWSTGLGHGDALHVGDLDPTRAG
LEIFKVSEDSSKPGSWFADARTGQILWSTPTAGDNGRGVSGDIWAGSPGAESWSSAVSGL
ANTRGQNVGRKPSSTNFLVWWDGDPVRELLDATRIDKYGPNGDTRLLTASGVAANNGTKA
TPALSADLLGDWREEVIWRTSDNRALRIYSTPNPTGTRLHTLMHDPQYRTAVAWQNTAYN
QPPHPGFFLGDGMTTPPAPAIYLR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
ctggtcgccgggaccaccgccgccctcctcgtcgccggtgggctgaccgccgccaccgcc
tccgccgacgcccccggatgccggatcgactaccgggtcaccaaccagtggtccggcgga
ttcggcgccgacgtcaccatcaccaacctcggcgaccccgtcgacggctggaccctcacc
tggtccttcaccgccggacagcaggtcgcccaggcgtggaacgccaccgtcacctccacc
ggcgcccaggtcaccgcccgcgacgtcggttacaacgccgtcatcggcaccggcggcacc
gccgccttcggcttcaacggctcctggaccggcagcaaccccgtaccggcgagcttcgcc
ctcaacggcaccacctgcaccggagcgaccaccccgaccaccgggccgccgaccaccccg
cccccgacgacaccaccccccaccaccccgccccccaccaccgggccgccaccgaaccca
cccgccggggccaagcagatggaacgactcgaccgagggctggtcagcgtccgctccggc
aacggcaacctcgtctcctggcggctgctcggcaccgagaccaccggggtgtcgttcaac
ctctaccggggcaccacccgcgtcaacaccacccccatcaccggtgccaccaaccacctc
gacaacggtgcggcagccggcaccacctacaccgtccgcgccgtggtcggcggcgtcgaa
caacccgcctcaccgcccgcgctccagttcggcaacggctacctcgacgtccccatccaa
cctcccgccggcgggaccacccccagcggcgaggcgtacacctacaccgccaacgacgcc
ggaaccggtgacctcgacggggacggccgatacgacctcgtcgtcaagtgggaccccacc
aacgccaaggacaacgcccagtccggctacacgggcaacgtgtacgtcgacgcgtacacc
ctcaccgggaaccgcctctggcgcatcgacctgggtcgcaacatccgcgcgggggcccac
tacacccagttccaggtctacgactacgacggcgacggggacgccgaggtggccatgaag
accgccgacggcacccgctccggcaccggccagaccatcggcaacggcagcgccgaccac
cgcaactccagcgggtacgtcctcgccggccccgagtacctgaccatgttcgacggccgg
accggtgccgtcgcctccactgtcacctacgacccgccccggggcaacgtctcctcctgg
ggcgacaactacggcaaccgggtcgaccggttcctcgccgggaccgcctacctcgacggc
caacgcccctcactgatcatggcccggggctactacacccgcgccgtcgtcgccgcctgg
gacttccgcaacggcaccctcaccaaacggtggaccttcgactccgccacctccggcaac
ggtgccgcccacggccagggcaaccacagcctctccgtcgccgacgtcgacgccgacggc
cgacaggagatcgtgtacggcgccgccaccatcgacgacaacggccgcctgctctggtcc
accggcctcggacacggcgacgccctgcacgtcggcgacctcgaccccacccgggccgga
ctggagatcttcaaggtcagcgaggactccagcaaacccggctcctggttcgccgacgcc
cgcaccgggcagatcctctggtccaccccgacggcgggcgacaacggccggggcgtctcc
ggcgacatctgggccggcagccccggcgccgaatcctggtcgtcggcggtcagcggcctg
gccaacacccgaggacagaacgtcggccgcaagccctcctccaccaacttcctcgtctgg
tgggacggcgacccggtccgcgaactgctcgacgccacccggatcgacaagtacggcccc
aacggcgacacccggctgctcaccgcctccggcgtcgccgccaacaacggcaccaaagcc
acccccgccctcagcgccgacctgctcggcgactggcgggaggaggtgatctggcggacc
agcgacaaccgggccctgcgcatctacagcaccccgaacccgaccggcacccgcctgcac
accctcatgcacgacccgcagtaccggacggccgtcgcctggcagaacaccgcctacaac
cagccgccccacccgggcttcttcctcggcgacggcatgaccacgccaccggcacccgcc
atctacctgcgctga
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