Microvirga thermotolerans: GDR74_08540
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Entry
GDR74_08540 CDS
T06255
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mico
Microvirga thermotolerans
Brite
KEGG Orthology (KO) [BR:
mico00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mico03016
]
GDR74_08540 (rnd)
Enzymes [BR:
mico01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GDR74_08540 (rnd)
Transfer RNA biogenesis [BR:
mico03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GDR74_08540 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QFU16267
UniProt:
A0A5P9JUI1
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All DBs
Position
complement(1822776..1823936)
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AA seq
386 aa
AA seq
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MDLISTTADLRRACERLAAHPFVTVDTEFLRETTYYPRLCLIQMAGPDPADAVLVDPLAP
DMDLEPFLGLMADPRVVKVFHSARQDLEIVWNLGRMVPAPLFDTQVAAMVCGYGDSVSYE
QLANDLAKARIDKSSRFTDWSRRPLTDAQLTYALSDVTHLVKIYEALTAQLEKNGRSAWL
AEEMAILSSPETYQADPEHAWKRLAGRLRKAKEVAVLMEVAAWREREAQSRDVPRGRILK
DDALVDIAIAAPRSVEALGRLRTIPNGFERSRTGADILEAVERGLARDPATVPMPERSRG
RGNTGAVVDLLKVLLKAVAEQEGVAPKIIATVDDLEAIAENDAADVPALHGWRRTLFGEK
ALALKNGQLGLVLERGRVKMRAVAPA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacttgatctctacgaccgccgatctccgcagggcctgcgagcgcctcgccgcccat
cccttcgtgaccgtcgacacggaattcctgcgcgagaccacgtattacccccggctctgc
ctgatccagatggcaggtcccgacccggccgatgccgtgctggtcgaccctctggccccg
gacatggacctggagcccttcctcgggctgatggccgatcctcgcgtggtcaaggtgttt
cactccgcccggcaggacctggaaatcgtctggaacctgggccgcatggtgccagcgccc
ctgttcgacacccaggtggcggccatggtgtgcggctacggcgactcggtctcctacgag
cagctcgccaacgacctcgccaaggcccgcatcgacaagtcctcccgcttcaccgactgg
tcccgccgcccgctcaccgacgcccagctcacctacgccctctccgacgtcacccatctc
gtgaagatctacgaggcgctcaccgcccagctcgagaagaacggccgctccgcctggctg
gcggaggagatggccattctctcctcccccgagacctaccaggccgacccggagcatgcc
tggaagcgcctggccgggcgcctgcgcaaggcgaaggaggtcgcggtgctcatggaggtt
gccgcctggcgcgagcgggaggcgcagagccgggacgtgccgcgcgggcgcatcctcaag
gacgacgccctcgtcgacatcgccatcgcggcgccccgcagcgtcgaggccctgggccgc
ctccgcacgatcccgaacgggttcgagcgctcgcgcaccggggccgacattctcgaggcc
gtggagcgcggtctcgcccgcgacccggcgacggtgcccatgccggagcgcagccgggga
cgcggcaacaccggcgcggtggtcgatctcctgaaggtgctgctcaaggcggtcgccgag
caggagggcgttgcgcccaagatcatcgccacggtggacgacctcgaagccatcgccgag
aacgacgcggccgacgtccctgctctccacggctggcggcggaccctgttcggggaaaag
gccctggcgctgaagaacgggcagctcggcctcgtgctggagcgcgggcgggtgaagatg
cgggccgtcgcgccggcctga
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