Microvirga thermotolerans: GDR74_09270
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Entry
GDR74_09270 CDS
T06255
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mico
Microvirga thermotolerans
Pathway
mico03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mico00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GDR74_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mico03019
]
GDR74_09270
Messenger RNA biogenesis [BR:
mico03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GDR74_09270
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QFU16400
UniProt:
A0A5P9JYB3
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Position
1998787..2000460
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AA seq
557 aa
AA seq
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MASSHDELVFLPLGGLGEIGMNAALYGFGPELDRQWILVDCGMGFGGEEHLPGIDLVYPD
LRFIEEERHNLLGIFITHAHEDHIGALVEMWPRLRAPVYATRFAAGLLETRRLSEPGAPK
IEIKEIAPGQRIKAGPFDVEYVPVAHSIPESNALAIRTPLGLVVHTGDWKLDPTPYLGSL
TSEEAFRALGDEGVLALVCDSTNVVREGESPSEADVAKNLATLIKDAPHRVAITTFASNV
ARIRSVAEAARECGREVVVVGRAMERVIDVATECGYLDGLPEFRKPDTFGYLPRDKVVAL
LTGSQGEPRAALARIAQDEHPDIALSQGDRVIFSSRAIPGNEREIGAIINSLVEQGIEVV
TDRSELVHVSGHPRRGELAQMYRWTRPRIAIPAHGEALHLAEHAKFARKQGVEEVVQARN
GTLVRLAPGTAEIVDRLPAGRLYRDGNIVIEAGERALPERRKLAFAGIVTIAIAIDDKGE
LAGDPIVDAMGLPEKNRQGENMLDLIADTVGDVLDGMPKGRRRDPEAVEQAVHRGVRAAV
NAAWGKKPACHVLVVEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctcacgacgaactggtattcctgcccctgggaggcttgggcgagatcggg
atgaatgccgcgctctacggcttcggccccgagctcgacaggcaatggatcctggtggat
tgcggcatgggcttcggcggggaggagcacctgccggggatcgatctggtctatccggac
ctgcgcttcatcgaggaggagaggcacaacctcctcggcatcttcatcacccatgcccac
gaggaccatatcggcgccctcgtcgaaatgtggccgcgcctgcgcgcgccggtctatgcg
acccgcttcgcggccgggcttctggagacccggcgcctctccgagcccggcgcgccgaag
atcgagatcaaggagatcgcgccgggccagcgcatcaaggccggcccgttcgatgtcgag
tatgtccccgtggcgcattcgatcccggaatcgaacgcgctcgctatccgcaccccgctg
gggctcgtggtgcatacgggcgactggaagctcgacccgacgccctatctcggcagcctg
acctcggaggaggcgttccgggccctcggcgacgagggcgttctggcgctggtctgcgat
tccacgaacgtggtgcgcgagggcgagagcccgagcgaagccgatgtggcgaagaacctc
gccaccctcatcaaggatgcgccccatcgcgtggcgatcaccaccttcgcgtcgaacgtg
gcccgaatccgctccgtcgcggaggcggcgcgcgagtgcgggcgcgaggtggtcgtcgtc
gggcgcgccatggaacgcgtgatcgacgtggccacggagtgcggctatctcgacggcctg
ccggaattccgcaagcccgacaccttcggctacctgccccgggacaaggtggtggcgctg
ctcacgggctcgcagggcgaaccgcgcgccgcgctcgcccgcatcgcgcaggacgagcat
ccagacattgccctctcgcagggggacagggtcatcttctcgtcgcgggccatcccgggg
aacgagagggaaatcggcgccatcatcaacagcctcgtggagcagggcatcgaggtcgtc
acggaccgttcggagctggtccacgtctcggggcacccccgcaggggggagctcgcgcag
atgtaccgctggacccggccgcgcatcgcgatcccagcccacggcgaggcgctgcatctg
gccgagcatgcgaagttcgcccgcaagcagggggtcgaggaggtggtccaggcccgcaac
ggcaccctcgtgcgcctcgcgcccggaacggcggagatcgtcgaccggcttcccgccggg
cgcctctacagggacggcaacatcgtgatcgaggccggcgagcgggccctaccggaacgg
cgcaagctcgccttcgccggcatcgtcaccatcgccatcgccatcgacgacaagggcgag
ctggccggcgatcccatcgtggacgccatgggcctgccggagaagaaccggcagggcgag
aacatgctggacctcatcgccgacacggtgggagacgtgctggacggcatgcccaagggc
cgccggcgcgacccggaggcggtcgagcaggccgtccacaggggcgtccgggcggccgtc
aatgcggcctggggcaagaagcccgcctgccatgtcctcgtcgtcgaggtataa
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