KEGG   Microvirga thermotolerans: GDR74_09270
Entry
GDR74_09270       CDS       T06255                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mico  Microvirga thermotolerans
Pathway
mico03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mico00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GDR74_09270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mico03019]
    GDR74_09270
Messenger RNA biogenesis [BR:mico03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GDR74_09270
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QFU16400
UniProt: A0A5P9JYB3
LinkDB
Position
1998787..2000460
AA seq 557 aa
MASSHDELVFLPLGGLGEIGMNAALYGFGPELDRQWILVDCGMGFGGEEHLPGIDLVYPD
LRFIEEERHNLLGIFITHAHEDHIGALVEMWPRLRAPVYATRFAAGLLETRRLSEPGAPK
IEIKEIAPGQRIKAGPFDVEYVPVAHSIPESNALAIRTPLGLVVHTGDWKLDPTPYLGSL
TSEEAFRALGDEGVLALVCDSTNVVREGESPSEADVAKNLATLIKDAPHRVAITTFASNV
ARIRSVAEAARECGREVVVVGRAMERVIDVATECGYLDGLPEFRKPDTFGYLPRDKVVAL
LTGSQGEPRAALARIAQDEHPDIALSQGDRVIFSSRAIPGNEREIGAIINSLVEQGIEVV
TDRSELVHVSGHPRRGELAQMYRWTRPRIAIPAHGEALHLAEHAKFARKQGVEEVVQARN
GTLVRLAPGTAEIVDRLPAGRLYRDGNIVIEAGERALPERRKLAFAGIVTIAIAIDDKGE
LAGDPIVDAMGLPEKNRQGENMLDLIADTVGDVLDGMPKGRRRDPEAVEQAVHRGVRAAV
NAAWGKKPACHVLVVEV
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggcttcctctcacgacgaactggtattcctgcccctgggaggcttgggcgagatcggg
atgaatgccgcgctctacggcttcggccccgagctcgacaggcaatggatcctggtggat
tgcggcatgggcttcggcggggaggagcacctgccggggatcgatctggtctatccggac
ctgcgcttcatcgaggaggagaggcacaacctcctcggcatcttcatcacccatgcccac
gaggaccatatcggcgccctcgtcgaaatgtggccgcgcctgcgcgcgccggtctatgcg
acccgcttcgcggccgggcttctggagacccggcgcctctccgagcccggcgcgccgaag
atcgagatcaaggagatcgcgccgggccagcgcatcaaggccggcccgttcgatgtcgag
tatgtccccgtggcgcattcgatcccggaatcgaacgcgctcgctatccgcaccccgctg
gggctcgtggtgcatacgggcgactggaagctcgacccgacgccctatctcggcagcctg
acctcggaggaggcgttccgggccctcggcgacgagggcgttctggcgctggtctgcgat
tccacgaacgtggtgcgcgagggcgagagcccgagcgaagccgatgtggcgaagaacctc
gccaccctcatcaaggatgcgccccatcgcgtggcgatcaccaccttcgcgtcgaacgtg
gcccgaatccgctccgtcgcggaggcggcgcgcgagtgcgggcgcgaggtggtcgtcgtc
gggcgcgccatggaacgcgtgatcgacgtggccacggagtgcggctatctcgacggcctg
ccggaattccgcaagcccgacaccttcggctacctgccccgggacaaggtggtggcgctg
ctcacgggctcgcagggcgaaccgcgcgccgcgctcgcccgcatcgcgcaggacgagcat
ccagacattgccctctcgcagggggacagggtcatcttctcgtcgcgggccatcccgggg
aacgagagggaaatcggcgccatcatcaacagcctcgtggagcagggcatcgaggtcgtc
acggaccgttcggagctggtccacgtctcggggcacccccgcaggggggagctcgcgcag
atgtaccgctggacccggccgcgcatcgcgatcccagcccacggcgaggcgctgcatctg
gccgagcatgcgaagttcgcccgcaagcagggggtcgaggaggtggtccaggcccgcaac
ggcaccctcgtgcgcctcgcgcccggaacggcggagatcgtcgaccggcttcccgccggg
cgcctctacagggacggcaacatcgtgatcgaggccggcgagcgggccctaccggaacgg
cgcaagctcgccttcgccggcatcgtcaccatcgccatcgccatcgacgacaagggcgag
ctggccggcgatcccatcgtggacgccatgggcctgccggagaagaaccggcagggcgag
aacatgctggacctcatcgccgacacggtgggagacgtgctggacggcatgcccaagggc
cgccggcgcgacccggaggcggtcgagcaggccgtccacaggggcgtccgggcggccgtc
aatgcggcctggggcaagaagcccgcctgccatgtcctcgtcgtcgaggtataa

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