Microvirga thermotolerans: GDR74_09300
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Entry
GDR74_09300 CDS
T06255
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mico
Microvirga thermotolerans
Pathway
mico03030
DNA replication
mico03430
Mismatch repair
mico03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mico00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GDR74_09300 (dnaE)
03430 Mismatch repair
GDR74_09300 (dnaE)
03440 Homologous recombination
GDR74_09300 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mico03032
]
GDR74_09300 (dnaE)
03400 DNA repair and recombination proteins [BR:
mico03400
]
GDR74_09300 (dnaE)
Enzymes [BR:
mico01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GDR74_09300 (dnaE)
DNA replication proteins [BR:
mico03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GDR74_09300 (dnaE)
DNA repair and recombination proteins [BR:
mico03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GDR74_09300 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
HROB
Motif
Other DBs
NCBI-ProteinID:
QFU16406
UniProt:
A0A5P9JXN8
LinkDB
All DBs
Position
2005628..2009098
Genome browser
AA seq
1156 aa
AA seq
DB search
MARVLHDIGFVHLHVHSSYSLLEGALKIAQLAKLAAADRQPALALTDTNNLFGALEFSEK
LAGAGIQPIAGVQLSVCFEEPDPVARIVPQPASVVLLAQTDEGYRNLMRLVSHAYFGVPL
GEPPRVTAPDLARHGEGLIALTGGFTGPLDSALRTGREELAQARLDILKDAFGHQLYVEI
QRHGLDEERMVEPALIGLADRNGLPVVAANEPFFSAPGDYEAHDALLAIAEGRIVSDDNR
RRLSPEHYFKTRRQMMELFADLPDALQASVEIAMRCSTRVRTRKPILPSFGIGPDAAALD
EGEELQRQAEEGLAKRLAAHGPAPGLTEQDYRDRLAYEIGIIRKMKFPGYFLIVSDFIKW
AKDHNIPVGPGRGSGAGSLVAYALTITDLDPLRFSLLFERFLNPERVSMPDFDIDFCVEG
RERVIEYVQRRYGEEQVAQIITFGTLLARGVMRDVGRVLEMPYGQVDKLTKLVPQNPANP
VTLAQAIEGEPRLQAAIEEEPVVKRMLDIAQKLEGLHRHASTHAAGVVIGDRPLQELVPL
YRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTVLRTAVDLIRRKGIEIDLSALPLDD
RKTYEMLRRGETVGVFQVESAGMRKALVEMETDRFEDIIALVALYRPGPMANIPVYCARK
LGKDEHNKKDWYPHEKLEPILKETFGIIVYQEQVMEVAKVLAGYSLGDADLLRRAMGKKI
KAEMDAQRERFLTGAAQGGLDRAKANEIFDLLAKFADYGFNKSHAAAYALVAFQTAYLKA
NHPVEFLAASMTLDLDNTDKLSEFRREAQRLGIRVEPPSINRSGVVFDVKYDADGNGAIL
YALAAVKGVGRQAIEAVVEARGDRPFESLADFARRINPRMLNKRTLENLIAAGAFDEIEP
DRARACAAVDAMMSLAQQCHEAANGGMTDMFGGVASADVPLRVSSYEPWPAAVKLQKEYD
AVGFFLSGHPLDEYGDLLKKLRVQSWADFSRSVKAGNSVGRVAATVLDRQERRTKTGNKM
GIITLSDQTGQFEAIVFSEGLQRLRDILEPGNAVVLMLQAGVEGEEVRARIGMAELLEEA
IAKHQKGMRIFLRDERPIASVQERLRAKGEGEVSLVLILDDGDREVEVKLPGRYMATPQV
AGAIRAVPGVVDVHIN
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtccttcacgacatcggcttcgtgcatctgcacgtgcattcctcgtattct
ctgctcgagggggccctgaagatcgcgcagctcgccaagctcgccgccgcggaccggcag
ccggcgctcgcgctcaccgacaccaacaacctgttcggcgccctggagttctcggagaag
ctcgccggggccggcatccagcccatcgccggcgtgcagctctcggtctgcttcgaggag
ccggacccggtggcgcggatcgtgccccagcccgccagcgtcgtgctgctggcgcagacc
gacgagggctaccgcaacctcatgcgcctcgtgagccacgcctatttcggcgtgccgctc
ggcgagccgccccgggtgacggctcccgacctcgcccgccacggcgaggggctgatcgcg
ctgaccggcggcttcaccggaccgctcgattcggcgctgcgcaccgggcgggaggaactc
gcccaggcgcggctcgacatcctcaaggacgccttcggccaccagctctacgtggagatc
cagcgccacggcctcgacgaggagcggatggtggagccggccctgatcggcctcgcggac
cgcaacggccttcccgtcgtcgccgccaacgagccgttcttttccgcgccgggcgactac
gaggcgcacgacgccctgctcgccatcgccgaggggcggatcgtctccgacgacaaccgc
cgccgtctctccccggagcattacttcaagacgcgccggcagatgatggagctgttcgcg
gaccttcccgacgcgctccaggccagcgtcgagatcgccatgcgctgctcgacgcgcgtg
cggacgcgcaagcccatcctgccgagtttcggcatcgggcccgatgccgccgccctggac
gagggcgaggaactgcagcgccaggcggaggaggggctcgccaagcgcctcgccgcgcac
ggcccggcgccgggcctgaccgagcaggattaccgcgaccgcctcgcctacgagatcggc
atcatccggaagatgaagttccccggctacttcctgatcgtgtcggacttcatcaagtgg
gcgaaggaccacaacatcccggtcgggccggggcgcggctccggcgcgggctccctcgtg
gcctatgcgctcaccatcaccgacctggaccccctgcggttcagcctgctcttcgagcgc
ttcctcaatcccgagcgcgtctcgatgcccgacttcgacatcgacttctgcgtggagggg
cgcgaacgcgtcatcgagtacgtgcagcggcgttacggcgaggagcaggtcgcgcagatc
atcaccttcggcaccctgctcgcccgcggcgtcatgcgcgacgtcggccgggtgctggag
atgccctacggccaggtggacaagctcaccaagctcgtgccgcagaacccggccaatccc
gtgaccctcgcgcaggccatcgagggggagccgaggctccaggcggccatcgaggaggag
ccggtcgtcaagcgcatgctcgacatcgcgcagaagctcgagggcctgcaccgccacgcc
tccacccacgccgcgggcgtggtgatcggcgaccgcccgctccaggaactggtgccgctc
taccgagacccgaagaccgggatgcgcgtgacccagttcaacatgaagtgggtggagcag
gcgggcctggtgaagttcgacttcctcggcctcaagaccctgaccgtgctgcgcacggcg
gtcgacctcatccgtcgcaagggcatcgagatcgatctctcggcgctgcccctcgacgac
cggaagacctacgagatgctgcgccggggcgagacggtcggcgtgttccaggtggaatcg
gcgggcatgcgtaaggctctcgtcgagatggagaccgaccgcttcgaggacatcatcgcc
ctcgtcgccctctaccgtccgggcccgatggcgaacatccccgtctactgcgcccgcaag
ctcggcaaggacgagcacaacaagaaggactggtatccccacgagaagctcgagccgatc
ctcaaggagaccttcggcatcatcgtctaccaggagcaggtgatggaggtcgccaaggtg
ctcgccggctactcgctcggcgacgccgacctgctgcgccgcgccatgggcaagaagatc
aaggccgagatggacgcccagcgggagcgcttcctcaccggcgccgcgcagggcgggctc
gacagggccaaggcgaacgagatcttcgacctcctcgcgaaattcgccgactacggcttc
aacaagagccacgccgccgcctatgccctcgtcgcgttccagacggcctatctgaaggcc
aaccatccggtcgagttcctggccgcgtccatgacgctcgacctcgacaacacggacaag
ctgtcggaattccggcgcgaggcgcagcgcctcggcatccgggtcgagccgccgtccatc
aaccgctccggcgtggtcttcgacgtgaagtacgacgcggacgggaacggggcgattctc
tatgcgctcgccgccgtgaagggggtgggccgccaggccatcgaggctgtcgtggaggcg
cggggcgacaggccgttcgagagccttgcggacttcgcgcggcgcatcaatccgcgcatg
ctcaacaagcgtactctcgagaacctgatcgccgccggcgccttcgacgagatcgagccc
gaccgggccagggcctgcgccgcggtggacgccatgatgagcctcgcccagcagtgccac
gaggcggcgaacggcggcatgaccgacatgttcggcggcgtcgcctcggcggacgtgccc
ctgcgcgtgtcctcctacgagccgtggcccgcggcggtgaagctgcagaaggaatacgac
gcggtgggcttcttcctctcgggccacccgctcgacgagtacggcgacctcctcaagaag
ctgcgcgtccagagctgggccgacttcagccgctcggtgaaggcgggcaattccgtgggc
cgcgtcgccgccacggtcctcgaccgccaggagcgccggacgaagaccggcaacaagatg
ggaatcatcaccctgtcggatcagaccgggcagttcgaggccatcgtcttctcggaaggc
ttgcagcgcctgcgcgacatcctggagcccggcaacgccgtggtcctgatgctccaggcc
ggggtcgagggcgaggaggtgagggcgaggataggcatggccgagctcctggaggaggcc
atcgccaagcaccagaagggcatgcggatcttcctgcgcgacgagcgccccatcgccagc
gtccaggagcgcctgcgggccaagggggagggggaggtctccctggtcctcatcctcgac
gacggcgaccgggaggtggaggtcaagctccccggcaggtacatggcaaccccccaggtc
gcaggcgcgatccgcgccgtgccgggggtggtggacgtgcacattaactag
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