Microvirga thermotolerans: GDR74_16965
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Entry
GDR74_16965 CDS
T06255
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mico
Microvirga thermotolerans
Brite
KEGG Orthology (KO) [BR:
mico00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mico03032
]
GDR74_16965
03400 DNA repair and recombination proteins [BR:
mico03400
]
GDR74_16965
Enzymes [BR:
mico01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GDR74_16965
DNA replication proteins [BR:
mico03032
]
Prokaryotic type
DNA Topoisomerases
GDR74_16965
DNA repair and recombination proteins [BR:
mico03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GDR74_16965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CFAP107
Carbam_trans_N
Motif
Other DBs
NCBI-ProteinID:
QFU17771
UniProt:
A0A5P9K023
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All DBs
Position
complement(3577657..3578808)
Genome browser
AA seq
383 aa
AA seq
DB search
MPLDAASSPDDLVDPRDAAETAGLVYVSDEEPGIRRRKAGKGFSYVGPDGSRITDKATLE
RIKALAIPPAYTDVWICPKPNGHIQATGRDARGRKQYRYHPAFREIRESTKYEHMIDFAK
ALPDIRRTIDAHMALRGLPREKVLATVVHLLENTLIRVGNSDYARQNKSYGLTTLRDPHV
KVEGGELRFQFKGKSGKTWNLKVRDRRIARIVKACQDLPGQHLFQYLDETGVQQSVTSAD
VNAYLREITGRDITAKDFRTWAGTVLAALALTEFEEFDSEAKAKKNIRAAIEKVAARLGN
TPAICRKCYVHPEVFSCYLEGELLLEIRDEVEAELRESLSALKPEEAAVLSLLQARLSEE
GAASRMKPAKGRRRAASGAEACA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgatgcagcctcctccccggacgacctcgtcgacccgcgcgatgccgcggag
acggcgggcctggtctacgtttccgacgaggagccggggatccggcggcgaaaggccggc
aaggggttctcctacgtggggcccgacggaagcaggatcacggacaaggccaccctggag
cgcatcaaggctctcgccattccccccgcctatacggacgtgtggatctgcccgaagccc
aacggccatatccaggccacgggccgcgacgcgcgcggacgcaagcagtaccgctaccat
cccgccttccgcgagatccgcgagagcacgaagtacgagcacatgatcgacttcgcgaag
gcgctgccggacatccgcaggaccatcgatgcccacatggccctgcgcgggctgccgcgg
gagaaggtgctcgccacggtggtgcatcttctcgagaacacgctgatccgcgtcggcaac
agcgattatgcccgccagaacaagagctacggcctcaccacgctgcgcgatccccacgtg
aaggtcgaaggcggggagctgcgcttccagttcaagggcaagagcggcaagacctggaac
ctcaaggtgagggaccggcgcatcgccaggatcgtgaaggcctgccaggatcttccgggc
cagcacctgttccagtatctcgacgagaccggtgtgcagcaatcggtcacgtctgccgac
gtgaacgcgtatctgcgtgagatcaccggccgcgacatcaccgcgaaggacttcaggacc
tgggcgggaaccgtgctcgccgcgctcgccctcacggagttcgaggaattcgacagcgag
gccaaggcgaagaagaacatccgcgccgccatcgagaaggtggcggcgcgtctcggcaac
acgccggccatctgccgcaagtgctacgtgcacccggaggtgttctcctgctatctcgag
ggcgaactcctgctcgagatccgggatgaggtggaggccgagcttcgcgagagcctgtcc
gcgctcaagcccgaggaggcggccgtcctttcgcttctgcaggcgcgcctgtcggaggag
ggcgccgcatcgcgcatgaagccggcgaagggcaggcgccgcgccgcatccggtgccgag
gcctgcgcctga
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