Microbacterium sp. PAMC21962: KY498_12935
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Entry
KY498_12935 CDS
T11478
Name
(GenBank) PKD domain-containing protein
Organism
micp Microbacterium sp. PAMC21962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
K319L-like_PKD
Laminin_G_2
Laminin_G_1
InlK_D3
DUF5122
Motif
Other DBs
NCBI-ProteinID:
QYF97060
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All DBs
Position
2731151..2736502
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AA seq
1783 aa
AA seq
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MVRIRAGVGVQRTRNIAAVFVTALAVVISGFVAVAPAHADVSPPTGTPSTVTADALPTVQ
INGIVWDQAVVGNVVYAAGKFTSARPAGAAAGTNETPRSNLLAYDITTGVLIASFAPSIN
AQVRQVEASPDGTRLYIVGDFTTVNGQTRNRVAAFDLPSGTLSSFNPNSNGVTSGVAATN
DTVYLTGTFGRISGNDRAGAAAVTRAGALLPWAPVLEGRQGRVVVVSPDGGKVVLGGNFQ
TLNGSSNPGYGLAMVSAADASLLPFQTNDVIRNAGLDASILSLKSDGAGSFYGTGYVYGS
GGNLEGSFRSSWATGSLVWVNDCHGDEYDVQPMGDVVYAAGHSHYCGSLEDGFPQSDPWT
FYRGIAVTNEPARITPAGLNNGYYDFGGNPAPRLLHWFPSFNTGSVSGASQGPWTVNGNG
QYLVYGGEFTRVNNTGQQGLVRFAVGGKSTNAQGPLLWNTAWPATAISLSGGSVRVSWPL
NYDRDSEFLTYEVLRNNVVVKTFENVRSKSPDWGLPAMAYIDNAVTSGTTYTYRVRATDP
QGHAILGGTATVTASGTSTASAYRDAVLADAPLDYWPLDDDSTTVSYDWAGAADLSVNSG
VARGTTGAMLNDARPSSTFDGSAAGFASTTQPIAGPDSFGIEAWIKTTTTAGGKIVGFGN
SSTGTSSNYDRHVYMEPDGRITFGVYPGSAQTITSSKAYNDGQWHQISAGMGASGMVLYV
DGVRVAMRTDVTSAQPYNGYWRVGGDSPWSGNAFFAGAIDDVAIYGAPLTRQQVAAHYVA
SGRTLTAATAPSDAYGAAVYALEPSLYWRLGEQNGPVAADSSGFGQPGTYIGAVAPGAGG
ALAGVADTAATFAGGQVISKNTFSNPRSYSLEAWFQTSTTTGGKIIGFGNSPDGNSNNYD
RHVYMTPDGTLVYGVWVGFAETLQSGPGYNDGAWHHVVATQGSEGMRLYVDGVLKGSNTQ
SNAQDYTGYWHVGGDVTWGPGDWEFDGRIDEVAVYAAPLAASDVAQHHALGATGAAANLP
PTASFTSSVTKLAVAVDGSGSTDADGTVAGYSWSWGDGTPDGAGATATHTYAAAGTYTVT
LTVTDDKGATATSSAPVVAVANQAPSASFTSTATDLTVAVDAGGSTDGDGHVTGYAWNWG
DGSPAGSGVTATHAYTTAGSYTITLTVTDDGATATQAIPVTVTAPVVGATYANDSFNRAV
AAGLGTADNGGAWTLSNTASNYRVDGTKAVFIQPSATSQRYAYLTGVSSTDTAVDVDVTL
PQRPVGGSAYVTVHSRRVGTAEYKARLVVAPSGGLTVQLQQTGVTLANVGTALTVAAGDT
LHVRTEAVGTSPTTLRVKVWKVGTAEPTAWTATATDATAALQAPGAVGLGVYLGGGVTTV
PFETRFDNFWAGSSAGAAPVNQAPTAAFTSTPSGLSVAVDGSGSSDPDGTVTAFAWDFGD
GATGTGATASHAYAAAGTYTVKLTVTDDKGATGTTTNAVTVTAPVGPVNQAPTAAFTSTP
SGLSVAVDGSGSSDPDGTVTAFAWDFGDGATGTGATASHAYAAAGTYTVKLTVTDDKGAT
GTTTNAVTVTAPVAAPFAVDAFERTSGTVLGAATTGGTWTQTSGTANVAIDAGAAKLTTQ
AAGQTRSATLNAATSTSTDLTFGFSLSAVPTGARMYVSALGRVVGSDDYRARWVIAPGGA
VQAQLARGGTVLASLDLPGFTVSAGTVYSVRVQVDGTGTTALRSKIWPAGTAEPAAWQLS
TTDTTAALQTAGFPGFTTYAGTGFTALPSAVRFDDFQARAVTP
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtattcgtgccggcgtcggcgtacagcggacgcggaacatcgcggcggttttc
gtgacggcgctcgccgtcgtcatcagcggcttcgtcgccgtcgctccggcgcacgccgac
gtcagcccgccgacgggaacaccgtcgaccgtcaccgccgacgcgctgccgacggtgcag
atcaacggcatcgtctgggatcaggcggtcgtcggtaacgtcgtctacgcggccggcaag
ttcacgtccgcgcgcccggcgggcgcggccgcgggcacgaacgagacgccccgcagcaac
ctgctcgcctacgacatcacgaccggcgtcctgatcgcctcgttcgcgccgtcgatcaac
gcgcaggtgcgtcaggtcgaggcctcgcccgacggcacgcgcctgtacatcgtcggcgac
ttcaccaccgtcaacgggcagacgcgcaaccgcgtggcggccttcgacctcccgagcggg
acgctctcgagcttcaacccgaactccaacggggtcacctcgggcgtcgccgcgacgaac
gacacggtctatctcaccggcaccttcggccgcatctccggcaacgaccgcgccggtgcg
gcggcggtcacccgcgccggcgcgctgctgccgtgggccccggtgctcgaggggcgccag
ggccgcgtcgtcgtcgtctcgcccgacggcggcaaggtcgtgctcggcggcaacttccag
acgctcaacgggagcagcaatccgggctacggcctcgcgatggtcagcgccgccgacgcc
tcgctgctgccgttccagacgaacgacgtgatccgcaacgccgggctggacgcctcgatc
ttgtcgctcaagtccgacggcgccgggtcgttctacggcacgggctacgtgtacggcagc
gggggcaacctcgaaggcagcttccgctcgtcgtgggcgacgggaagcctcgtgtgggtc
aacgactgccacggcgacgagtacgacgtccagccgatgggcgacgtcgtctacgcggcg
ggccactcccactactgcggcagcctcgaggacggcttcccgcagagcgacccgtggacg
ttctaccgcggcatcgccgtgaccaacgagcccgcccgcatcacgcccgccgggctcaat
aacggctactacgacttcggcggcaacccggcgccgcgactgctccactggttcccgagc
ttcaacacgggctcggtcagcggcgcatcgcagggaccgtggaccgtcaacggcaacgga
cagtacctcgtctacggcggcgagttcacccgcgtgaacaacaccggccaacagggcctc
gtgcgcttcgcggtcggcgggaagtcgaccaacgcgcaggggccgctcctgtggaacacg
gcgtggccggcgactgcgatctcgctgtcgggcggatccgtgcgcgtgagctggccgctc
aactacgaccgcgacagcgagttcctcacctacgaggtgctccgcaacaacgtcgtcgtc
aagacgttcgagaacgtgcgctccaagtcgcccgactggggcctccccgcgatggcctac
atcgacaacgccgtgacgtcgggaacgacctacacctaccgtgtgcgcgcgaccgatccg
caggggcacgcgatcctcgggggcaccgcgacggtgaccgcgagcgggacctcgaccgcg
agcgcctacagggatgccgtcctcgcggacgcgccgctggactactggcctctcgacgac
gactcgacgaccgtctcctacgactgggcgggcgcggccgacctgagcgtcaacagcggc
gtcgcacgcggcaccaccggcgccatgctcaacgacgcgcgaccctcgtcgaccttcgac
ggcagcgcggcggggttcgcctcgacgacgcagccgatcgccggtcccgactcgttcggc
atcgaagcgtggatcaagacgaccacgacggccggcgggaagatcgtcgggttcggcaac
agctccacgggcacctcgagcaactacgaccgccacgtgtacatggagccggacgggcgc
atcaccttcggcgtctacccgggctcggcgcagacgatcacgtcgtcgaaggcctacaac
gacgggcaatggcatcagatctccgcgggcatgggcgcgtcgggcatggtcctgtacgtc
gacggtgtgcgcgtggccatgcgcacggatgtcacgtccgcgcagccgtacaacggctac
tggcgcgtcggcggcgacagcccgtggtcgggcaacgccttcttcgcgggggcgatcgac
gacgtcgcgatctacggggcgccgctgacgcgccagcaggtcgccgcgcactacgtcgca
tcggggcgcacgctgaccgcggcgaccgcgccgagcgacgcctacggcgccgccgtgtac
gcgctcgagccctcgctctactggcgtctgggtgaacagaacggaccggtcgccgccgac
tcctccggcttcggccagcccggcacctacatcggcgcggtcgcgccgggcgcgggcggg
gcgctcgccggggtcgccgacaccgccgcgaccttcgccggcggtcaggtcatcagcaag
aacacgttctccaacccgaggtcgtactccctggaggcgtggttccagacgtcgacgacc
accggcggcaagatcatcgggttcggcaacagcccggacggcaactcgaacaactacgac
cggcacgtctacatgacgccggacggcaccctcgtctacggcgtgtgggtcgggttcgcc
gagacgctgcagtcggggcccgggtacaacgacggtgcgtggcaccacgtcgtggcgacc
caggggagcgagggcatgcggctctacgtcgacggcgtgctgaaggggtcgaacacccag
tcgaacgcgcaggactacaccggctactggcacgtcggcggcgacgtgacgtggggcccg
ggcgactgggagttcgacggtcgcatcgacgaggtcgccgtctacgcggccccgctcgcg
gcgagcgacgtcgcccagcatcacgcgctgggcgcgacgggagcggccgccaacctcccg
cccaccgcatcgttcacgtcgagcgtcaccaagctcgcggtcgccgtcgacgggagcggc
tcgacggatgccgacggcacggtcgccgggtacagctggtcgtggggcgacgggacgccc
gacggtgccggtgcgacggcgacgcacacctatgcggcggcgggcacctacacggtgacc
ctgaccgtcaccgacgacaagggggcgacggcgacgtcgtccgcgcccgtcgtcgcggtg
gccaaccaggcgccgtcggcgtcgttcacctcgaccgccaccgacctcacggtcgccgtg
gacgcgggcggatcgaccgacggcgacgggcatgtcacggggtacgcctggaactggggc
gacggctccccggcgggcagcggcgtcacggcgacccacgcctacacgacggcgggctcc
tacacgatcacgctcaccgtcaccgacgacggcgcgacggcgacgcaggcgatcccggtg
acggtgaccgctccggtcgtcggcgcgacctatgcgaacgactcgttcaaccgggccgtg
gcggcggggctcggcaccgccgacaacggcggtgcgtggacgctgtccaacacggcatcc
aactatcgcgtcgacggcacgaaggccgtcttcatccagccgtccgcgacgtcgcagcgc
tacgcgtacctgacgggggtgtcgtccaccgacaccgcggtcgacgtggacgtgacgctt
ccgcagcgtcccgtcggcggcagcgcgtacgtgacggtgcactcgcggcgcgtgggcacc
gcggagtacaaggcgcggctcgtcgtcgccccgtcgggcggcctcaccgtgcagttgcag
cagacgggcgtgaccctggcgaacgtgggcaccgctctcaccgtcgccgccggcgacacc
ctgcacgtgcggaccgaggcggtgggcacctcgcccacgacgctgcgggtgaaggtctgg
aaggtcggcacggccgagccgaccgcctggacggcgacggcgaccgacgccaccgccgcc
ctgcaggcgccgggggccgtcgggctcggcgtctacctcggcggcggcgtgaccaccgtg
cccttcgagacgcgcttcgacaacttctgggccggatcgtccgcgggtgcggctccggtg
aaccaggcgccgacggcggcgttcacctcgacgccgtcggggctgtcggtggcggtggac
ggttcgggctcgtccgatccggatggcacggtgacggcgttcgcgtgggacttcggtgac
ggggcgaccggcacgggggcgaccgcgtcgcacgcctacgcggcggccgggacgtacacg
gtgaagctgacggtgaccgacgacaagggcgccaccggcaccacgaccaacgcggtgacc
gtgaccgcgcccgtcggaccggtcaatcaggcgccgacggcggcgttcacctcgacgccg
tcggggctgtcggtggcggtggacggttcgggctcgtccgatccggatggcacggtgacg
gcgttcgcgtgggacttcggtgacggggcgaccggcacgggggcgaccgcgtcgcacgcc
tacgcggcggccgggacgtacacggtgaagctgacggtgaccgacgacaagggcgccacc
ggcaccacgaccaacgcggtgaccgtgaccgcgcccgtcgcggccccgttcgcggtggat
gccttcgaacgcacgtcggggacggtcctcggggcggcgaccaccggggggacctggaca
cagacctccgggacggccaacgtcgcgatcgacgccggcgcggcgaagctgacgacgcag
gccgccgggcagacccgttccgccacgctcaacgcggccacctcgacgagcacggatctg
acgttcggcttctcgctctccgccgtcccgacgggcgcccggatgtacgtctcggcgctc
ggccgggtcgtgggttccgacgactaccgggcccggtgggtgatcgcgcccggcggcgcc
gtgcaggcgcagctcgcgcgcggcggcaccgtgctggcgtcgctggatctcccgggcttc
accgtgagcgccggcacggtctacagcgtccgggtgcaggtcgacggcaccggaaccacg
gcgctgcgcagcaagatctggccggccgggacggccgagccggcggcgtggcagctgagc
acgaccgacacgacggccgcgctgcagacggccggcttccccggcttcacgacgtacgcg
ggcacgggcttcacggccctcccgtctgcggtgcggttcgacgacttccaggcgagagcc
gtgaccccgtga
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