Microbacterium sp. 1.5R: BMW26_02295
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Entry
BMW26_02295 CDS
T04912
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
micr
Microbacterium sp. 1.5R
Pathway
micr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMW26_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micr03019
]
BMW26_02295
03400 DNA repair and recombination proteins [BR:
micr03400
]
BMW26_02295
Enzymes [BR:
micr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMW26_02295
Messenger RNA biogenesis [BR:
micr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMW26_02295
DNA repair and recombination proteins [BR:
micr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMW26_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
PSD2
HHH
Motif
Other DBs
NCBI-ProteinID:
APH46557
LinkDB
All DBs
Position
469343..471307
Genome browser
AA seq
654 aa
AA seq
DB search
MDWEPQGAGYEPPLDWGQGPVTPVGSASARSSARPSAPGVTATAARQAAPSRYATAAEAL
HTVFGYDEFRGDQAAIVDQVISGGDAVVLMPTGGGKSVTYQVPALVREGTGLVISPLIAL
MHDQVDALRANGVNAAYLNSTQAIEERREVERAYVAGELDLIYVAPERLSSPQTTALLQR
GTLSVIAIDEAHCVSQWGHDFRPDYLALGDLGERFPGVPRMALTATATRATHKELTERLR
LDAAQHYVASFDRPNIQYRIVPKVDPRKQLVSFIRAQPEGSVGIVYALSRKSVEQTATYL
AAQGFDALPYHAGLPAEVRAKNQSRFLREDGVVMVATIAFGMGIDKPDVRFVAHIDLPKS
VEGYYQETGRAGRDGEPSIAWMAYGLGDVVQQRRMIDQSPGDRTFKMRLGQHLDAMLALC
ETVECRRQNLLGYFGQDSQPCGNCDTCLDETETFDGLIPAQKLLSTIVRLKRERNQAFGA
GHLIDILRGASTERIRQQGHEKLATYGIGADLSDQDWRSVVRQLLARGIIVAQGDYGTLA
PGEQSAGVLKGETPVPLRKDTIGRPASSPRARKASAADALDQSDRPLFEALRAWRAETAR
EQGVPAYIVFGDATLRALAEHRPASLADLDGITGIGAKKRDAYGEGVLTVIAAG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggactgggagccgcagggcgccgggtacgagccgccgctcgactggggccagggcccc
gtgacaccggtcggatcggcgtccgcgcgctcatccgcacgcccgtctgctcccggggtg
acggcgacggccgcgcgacaggcggcccccagccgatacgcgactgcggccgaggcgctg
cacacggtcttcggctacgacgagttccgcggcgatcaggccgcgatcgtcgatcaggtc
atctcgggcggtgacgctgtcgtgctcatgcccaccggcggcggcaagagcgtcacctat
caggtgcccgcactcgtgcgcgagggcaccggcctcgtgatcagcccgctcatcgccctc
atgcacgaccaggtcgacgcgctccgggccaacggcgtcaacgccgcctatctcaactcg
acccaggcgatcgaagagcggcgcgaggtcgaacgggcgtacgtcgccggcgaactcgac
ctcatctacgtcgcccccgagcggctgtcctcgccgcagacgaccgccctgctgcagcgc
ggcacgctcagcgtcatcgcgatcgacgaggcgcactgcgtgtcgcagtggggtcatgac
ttccgccccgactacctcgcactcggcgatctgggcgagcggttccccggtgtaccgcgc
atggcgctcacggccaccgccacccgggcgacgcacaaggagctcaccgagcgactgcgt
ctcgacgccgcccagcactacgtggccagcttcgaccggcccaacatccagtatcggatc
gtgcccaaggtcgatccgcgcaagcagctcgtctcgttcatccgcgcgcagccggagggc
tcagtcggcatcgtctacgcgctgagccggaagtccgtcgagcagaccgcgacctatctc
gccgctcagggcttcgacgcgctgccgtatcacgccggtcttccggccgaggtgcgcgcg
aagaaccagtcccggttcctgcgcgaggacggcgtcgtgatggtcgcgacgatcgccttc
ggcatgggaatcgacaagcccgatgtgcgcttcgtcgctcacatcgacctgccgaagtcc
gtcgagggctactaccaggagaccggtcgcgcgggccgtgacggcgagccgtcgatcgcc
tggatggcgtacggcctgggcgacgtggtgcagcagcgccgcatgatcgaccagagcccg
ggcgatcgcacgttcaagatgcgcctggggcagcacctcgacgcgatgctcgcgctgtgc
gagacggtcgagtgccgccgccagaaccttctcggctacttcgggcaggactcgcagccg
tgcggcaactgcgacacgtgcctcgacgagaccgagaccttcgacggcctgatcccggca
cagaagctgctctcgacgatcgtgcggctcaagcgcgagcgcaatcaggccttcggagcc
gggcatctgatcgacatcctccgcggagcctcgaccgagcgcatccgtcagcaggggcac
gagaagctcgcgacctatggaatcggcgccgacctctccgaccaggactggcgcagcgtc
gtccgccagctgctcgcacgggggatcatcgtggcgcagggcgactacggcacgctcgct
ccgggcgagcagtcggccggcgtgctgaagggcgagaccccggtgccgttgcgcaaggac
acgatcggacgccccgcttcgtcgccgcgggcacgcaaggcgagtgcggcggacgcgctc
gatcagtccgaccgcccgctcttcgaggcgctgcgggcgtggcgcgccgagacggcgcgc
gagcagggcgttccggcgtacatcgtcttcggcgatgcgacgctgcgtgcgctcgccgag
catcgtccggcttcgctggccgacctcgacgggatcacggggatcggcgccaagaagcgg
gatgcctacggcgagggagtgctcaccgtcatcgcggccggttga
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