Microbacterium sp. 1.5R: BMW26_03195
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Entry
BMW26_03195 CDS
T04912
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
micr
Microbacterium sp. 1.5R
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micr03019
]
BMW26_03195
Enzymes [BR:
micr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BMW26_03195
Messenger RNA biogenesis [BR:
micr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BMW26_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_16
AAA_25
ParA
AAA_11
Cas3-like_C_2
AAA_19
RoxA-like_Cyt-c
CON_HrpB
AAA_30
nSTAND3
ResIII
LAM_C
Motif
Other DBs
NCBI-ProteinID:
APH44078
UniProt:
A0AAC9P4N4
LinkDB
All DBs
Position
complement(679916..682468)
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AA seq
850 aa
AA seq
DB search
MTAAAFDLAAIGAGLSFAAALDELGAALDGSGSVVVSAPPGTGKTTLVPPLLASRSSGRV
IVTQPRRVAARAAARRLAHLDGSALGTRVGFTVRGERSAGAATRIEFVTAGVLLRRMIDD
PGLDGVDAVILDEVHERALETDLLIGLLSEVRELRDDLVVVTMSATLDAARIASVLGTDD
QPAPIVDHGVPAFPLTERWAPSPTPRLDERGVTWGFLDHVARTTTAAALELVRENPLADV
LVFAPGAREVSEISRRIRDASAAFDVRELHGRIPAAEQDAVIRGRRPDEPPRIIVTTSLA
ESSLTVPGVRLVVDSCLSRHPQRDAARGMTGLVTTAASRSSCVQRAGRATRQGPGVVIRC
VDERTYAAAPARPAPEIAVTDLADAALLLACWGAPGAEGLRMIDPPPRDNLADAVSVLRG
LGAIDDEGRATAEGRALARIPADPRLARALRDGGPVVGSRLAAEVVAVLGGDLRIAEADV
SQALITLRGGRTPDARRWRDDANRLERMVAPARDVRSDHDGIGLVIALAFPDRIAHRVER
TADGAVFLLASGTRAGVTGPLAAVEWLAVADVARATARVAAGSGAIIRSAAVLTEAQMER
AASHLLTDRVEAEFTGGRVQARRERRVGAILRSSSPVRPSAREGRDAVRRAILRDGLGMF
AWSDAATAFRRRLALLRRELGGPWPDVSDAGLLGTLDDWLAPELDTLAGGTPAARVDLSS
ALRRLLPWPEAARLDELAPERLAVPSGSRIRITYPDPDDTSAPPVVAVKLQECFGWAETP
RLVDGRVPVLFHLLSPAGRPLAVTDDLASFWSGPYAQVRAEMRGRYPRHPWPEDPWAAVP
TKHTKNRAAR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccgccttcgacctcgccgccatcggcgccgggctctcgttcgcggccgcg
ctggacgaactcggggccgcgctcgacgggagcggatcagtggtcgtgagcgccccaccc
ggcacgggcaagaccactctcgtgccgccgctgctggcgtcacggtcgtccgggcgcgtg
atcgtcacccagcctcgccgcgtcgcggctcgcgccgcagcccgccgcctcgctcatctc
gacggctcggcgctcggcacccgcgtgggcttcaccgtgcgcggcgagcggtcggcaggt
gcggcgacccgcatcgagttcgtcaccgccggagtgctgctgcgtcgcatgatcgacgac
cccggcctcgacggtgtggatgccgtcatcctcgatgaggtgcacgagcgcgcactcgag
accgacctgctgatcggcctgctctcggaggtccgcgagctgcgcgacgacctcgtggtc
gtcaccatgtcggcgacgctggatgccgcgcgcatcgcctccgtcctcggcaccgacgac
cagcccgcaccgatcgtcgaccacggcgtgccggcgttccctctcaccgagcgctgggct
cccagcccgacgccgcgcctcgatgagcgcggtgtcacctggggcttcctcgaccacgtc
gcacgcacgacgacagcggccgcactcgagctggtccgcgagaaccctctggcggatgtg
ctggtgttcgccccgggcgcgcgggaggtgtcggagatcagccgccgcatccgcgatgcg
agcgcggcgttcgacgtgcgagagctgcacggtcggatccccgcggcggagcaggatgcc
gtgatccgcgggcgtcgaccggatgagcctccgcgcatcatcgtgacgacttcgctcgcg
gagtcgtcgctcaccgtgcccggagtgcgcctcgtcgtcgacagctgtctgtcgcggcat
ccgcagcgtgatgccgcgcgcggcatgacgggtctggtcacgactgccgcgtcgcgctcg
tcatgcgtgcagcgcgccggtcgcgccacgcgccagggaccgggcgtcgtcatccgctgc
gtcgacgaacgcacctatgcggccgccccggcccgcccggcacccgagatcgcggtgacc
gacctcgcggatgccgccctgctgctcgcctgctggggtgccccgggtgcagaaggcctg
cgcatgatcgacccgccgccccgagacaacctagccgatgccgtctctgtgctacgcggt
ctcggcgcgatcgacgacgagggccgcgccacggccgagggtcgagctctcgcccggatc
cccgccgacccccggctcgcccgcgctctccgtgacggcggcccggtcgtcggcagccgt
ctcgccgcagaggtcgtcgccgtgctcggcggcgacctgcgcatcgccgaggccgacgtc
tcacaggcgctcatcaccctgcgcggcggacggacaccggacgctcgccgctggcgtgac
gacgcgaaccgcctcgagcgcatggtcgctccggcgcgggacgtgcgatcggatcacgac
ggcatcggactcgtgatcgcactcgcgttccccgaccggatcgcgcatcgcgtcgagcgc
accgccgacggagcggtcttcctcctggcatccggaacccgtgccggagtcaccggcccg
ctcgccgcagtcgagtggctcgcggtcgccgacgtcgcgcgggccacggcgcgagtggcg
gccgggtcaggcgcgatcatccgatccgcggctgtgctcacggaagcccagatggaacgc
gctgcgagccacctgctgaccgaccgagtcgaggcggagttcacgggaggtcgcgtgcag
gcgcgccgtgagcgccgcgtcggtgcgatcctgcgttcgtcctcgcccgtgcgcccctct
gctcgagaggggcgggatgccgtgcgccgcgcgatcctgcgcgacgggctcggcatgttc
gcctggtcggatgccgcgaccgcgttccgacgccgattggccctgctgcggcgagagctc
ggcggcccgtggcccgacgtgtcggatgccgggctgctcggcactctcgatgactggctc
gctcccgagctcgacaccctggcgggcggcacccccgcagcgcgagtggatctgtcctcg
gctctgcgtcgactgctgccctggcccgaggcggcgcgcctcgacgagctcgcacccgag
cgcctcgcggtgccgagcggatcccgtatccgcatcacctaccccgacccggacgacacc
tcggcacccccggtcgtcgctgtgaagctgcaggagtgcttcggctgggccgagacccct
cgactggtcgacggacgcgtgccggtgctgttccatctgctgtcgcccgcggggcgccct
ctcgcggtcaccgacgacctcgcctcgttctggtcgggcccctacgcccaggttcgcgcg
gagatgcgagggcgctacccgaggcatccttggccggaggacccgtgggcggccgtgccc
acgaagcacaccaagaaccgcgccgcgcgctga
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