Microbacterium sp. 1.5R: BMW26_05790
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Entry
BMW26_05790 CDS
T04912
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micr
Microbacterium sp. 1.5R
Pathway
micr03420
Nucleotide excision repair
micr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMW26_05790
03430 Mismatch repair
BMW26_05790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micr03400
]
BMW26_05790
Enzymes [BR:
micr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMW26_05790
DNA repair and recombination proteins [BR:
micr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMW26_05790
MMR (mismatch excision repair)
Other MMR factors
BMW26_05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
APH44527
UniProt:
A0AAC9K1U5
LinkDB
All DBs
Position
1234896..1238342
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AA seq
1148 aa
AA seq
DB search
MTAWTGAGNGISALDVAAALGLPAPTEAQQRVIESPPAPALVVAGAGSGKTETMAGRVVW
LVANGHVRRDQILGLTFTRKAAGELAERIGVRLALIDEYGRRGLLPHLPEIVASGALDRV
SRAANARQREVVRSQVLDELAARFGTGAVSTPRSAEDLLIRPKVSTYNAFADGIVREHAA
RIGRDSDVAMLSQAASWMLVRDVVLRADLPELEEIDRSVAGVVDAVQRLAGDSLDHRVDL
DRADRIALRQAEAFEPYLSNAEVATAAANLRALPALSVLVRDYIAEKERRGVLDFADQVS
GAYDIVESSPDVREDLRQQHQVVLLDEYQDTSVIQTQFLARLFRDTAVMAVGDPHQSIYG
WRGASADNLHAFARTFSEHESVGNYSLMTSWRNDRSILGVANRILGPLRRPGLDVPPLES
RPGAGPGAVEMSFPLTVDDEARAVAEWFAARRAEHDDLAKPHTGAVLFRSKRHMQTFAAA
LAAEGIPHRILGLGGLLATPEVVDVVSTLRVLHDPTAGSALIRLLVGPRFSVGVADMAAL
QQLAAELSRRDSGLLPLDDELRKRIRASRGADEALSIIDAVDVLRGLSDDYRLLAGITPD
GRSRIRAAGEMLERLRRASSLPLPDLLRLIELELRLDIELAANETRGPARIAATQLRAFT
DEVRSFLAADERGTISSLLAWLEKAESTDELVPRPEPPEPGVVQLLTIHGSKGLEWDAVA
VVRMVEGELPSRPTDTSGWFGFGVLPFALRGDSAALPTFSWIAPSDEELDAAKRQKAGIA
SLTSRSKTAPGAITVFKDAYREYQQEEERRLAYVAVTRARSHLLLTGAHWAGQKQPKKPS
PYLTEAMEILGIAPIEPVDPDENPYDGPGATLTWPLDPLGARRGVVEAAAAAVRAAADGE
PEAAPELARLLAERAARLRGTDASPPTRVPASRFKDYVTDFTGTVSSIVRPMPERPYRQT
RLGTLFHAWVERRSELVGVGQRVDEALWEVDEDDLSFVETVGGAEVSSADAADLETLQSI
FEASEWGALKPIAVEIEIDFALGGAVPGDERHIVICKLDAVYRREDRGGRIEIVDWKTGK
APRTPREREERMLQLALYRLAYHRRFGVPLEEIDVALYYVADDLVIRGARVYSESELFQR
WSAARAAR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgtggacgggagcggggaacgggatctctgctctggacgtcgccgccgcgctc
ggtctccccgcaccgacggaggcccagcagcgggtgatcgagtcgccaccggcaccggct
ttggtggtcgcgggcgcgggcagcggaaagaccgagacgatggccggccgcgtcgtctgg
ctggtcgcgaacgggcatgtgcgacgcgatcagatcctcggcctgaccttcacgcgcaag
gccgcgggtgagctcgcggaacgcatcggcgtccgtctggcgctcatcgacgaatacggg
agacgaggactgctgccgcacctgcccgagatcgtggcgagcggtgccctcgatcgggtg
tcgagagccgcgaacgccagacagcgcgaggtcgtccgatcgcaggtgctcgacgagctc
gccgcacgtttcggcaccggggcggtctcgaccccccgttcggccgaggatctgttgatc
cgtccgaaggtctcgacctacaacgcgttcgcggatggcatcgtgcgcgagcacgcggcg
cgcatcggccgcgactccgacgtcgccatgctcagccaggccgcatcctggatgctcgtg
cgcgacgtggtgctgcgcgccgacctgccggagctggaggagatcgaccggtcggtggcg
ggggtggtcgacgcggttcagagattggccggcgactcgctcgatcaccgggtcgatctc
gaccgcgccgatcgcatcgcgctgcgccaggccgaggcgttcgagccgtacctcagcaac
gcggaggtcgcgaccgcggctgcgaacctgcgcgctcttcccgctctgtccgtcctggtg
cgcgattacatcgccgagaaggagcgccgcggagtgctggacttcgccgaccaggtcagc
ggcgcctacgacatcgtggagtcgtctcccgacgtgcgcgaggacctgcggcagcagcat
caggtggtgctgctggacgaataccaggacacctcggtgatccagacgcagttcctcgcc
cgactcttccgcgacaccgcggtgatggcggtcggggatccgcaccagtcgatctacgga
tggcgaggcgccagcgcggacaatctgcacgccttcgcgcgcaccttctccgaacacgag
agcgtcggcaactacagtctgatgacgagctggcgcaacgaccggagcatcctcggtgtc
gccaaccgcatcctcggtccgctgcgcaggcccggattggatgtgccaccgctcgagtct
cgtcccggcgccggccccggagcggtcgagatgagcttcccgctcaccgtcgatgacgag
gctcgcgcggtcgccgaatggttcgcggcgcgtcgcgcggagcacgacgacctcgcgaag
ccgcataccggagcggtgctgttccggtcgaagcggcacatgcagacgttcgcggcggcc
cttgccgcagaagggattccgcaccgcatcctggggctcgggggactcctggcgaccccc
gaggtcgtcgatgtcgtgtcgacgctgcgcgtgctgcacgatccgacggcgggctctgcg
ttgatcaggctcctcgtcggtcctcgattctccgtcggtgtcgccgacatggcggcgttg
cagcagctcgcggcggagctctcccgtcgggacagcgggctgctgccgctggacgacgag
ctccgcaaacgcatccgcgcgtcacggggggcggacgaggcgctgtcgatcatcgacgcc
gtcgacgtgctccgcggtctcagcgacgactaccgccttctcgccgggatcacgccggac
gggcgttctcgcatccgtgccgcgggcgagatgctcgaacgcctccgacgggcgtcgtcg
cttccgcttcccgatctgctgaggctgatcgagctcgagctgcgtttggacatcgagctc
gcagcgaacgagaccagagggccggcgcgtatcgcggcgacgcagctgcgcgcgttcact
gacgaggtccggtcgttcctcgccgcagacgaacgggggaccatctcgagtctcctcgcc
tggttggagaaggccgagagcacggacgagctggtgccgcggcccgagccgcccgaaccc
ggggtcgtccagcttctgacgatccacggatccaaggggctggagtgggatgcggtcgcc
gtcgtccgcatggtcgagggcgaactgccgtcgcgcccgacggacacctcaggatggttc
ggcttcggagtgctgccgttcgctctgcgaggcgacagcgcggccctgccgaccttcagt
tggatagcgccctcggacgaagagctcgatgcggcgaagcggcagaaggcaggtatcgca
tcgctgaccagcaggagcaagacagcgccgggcgcgatcacggtcttcaaggacgcctac
cgcgagtatcagcaggaggaggagcgtcgactcgcctacgtcgccgtcaccagggcgcgc
agtcatctgcttctgaccggggcccactgggcggggcagaagcagccgaagaagccgagc
ccctatctgaccgaggcgatggagattctcggaatcgctccgatcgagcccgtggatccg
gacgagaacccctacgacggccccggcgcaacgctcacctggcctctcgacccgctcggc
gctcggcgtggagtcgtcgaggcagccgccgctgccgtgcgcgcggcagccgacggggag
ccggaggccgctcccgaactggcgcgtctgctcgccgagcgcgccgcccgattgcgtggc
accgacgcatcaccgcccacccgggtgccggcctcccgcttcaaggactacgtcaccgat
ttcaccggcaccgtgtcttccatcgtccgtccgatgcctgagcggccgtatcggcagacc
cggctgggcacgctgttccacgcatgggtcgagcggcggagcgaactcgtcggcgtcggt
cagcgcgtcgacgaggcgctgtgggaggtcgacgaggatgatctctcgttcgtcgagacc
gtcggcggagcggaggtctcgtccgccgacgccgccgacctcgagaccctgcagtcgatc
ttcgaggccagcgagtggggagcgctcaagcccatcgcggtcgagatcgagatcgacttc
gcgctgggtggcgctgtgccgggtgacgaacgccatatcgtcatctgcaaactcgacgcg
gtctatcgacgcgaagatcgcggcgggcgcatcgagatcgtcgactggaagacgggcaag
gccccacgcacacctcgggaacgggaggagcggatgctgcagctcgcgctctaccgtctc
gcctaccaccgtcgtttcggagtgcccctggaggagatcgacgtggcgctgtactacgtc
gcggacgacctcgtcatccgcggtgctcgcgtctactccgagtcggagctcttccagcgc
tggagcgctgctcgggcagcccgctga
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