Microbacterium sp. 1.5R: BMW26_06690
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Entry
BMW26_06690 CDS
T04912
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
micr
Microbacterium sp. 1.5R
Pathway
micr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMW26_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micr03021
]
BMW26_06690
03019 Messenger RNA biogenesis [BR:
micr03019
]
BMW26_06690
Transcription machinery [BR:
micr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BMW26_06690
Messenger RNA biogenesis [BR:
micr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMW26_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
AAA_25
Spore_III_AA
AAA_22
ATPase_2
VWA_2
Mor
Motif
Other DBs
NCBI-ProteinID:
APH44677
LinkDB
All DBs
Position
1436865..1438907
Genome browser
AA seq
680 aa
AA seq
DB search
MARSTRCARAAHVPETKEGVLVENFSETQNDQAAPAAEAAAKAASSDAATTAATEVAPAR
KRAPRRASTATAAAKAEKAEKAAASTDSAPATEAPAAEAPAADAAPKAKAPRRSRAKKAD
AENAESPAATAEAPAASAPAPAESTEAPAAKTAESNGSADAGSAEAGSADEPKKTTGRGR
RTAKKPAAEAETPAAEKPADAAPAEAAPAADSSSDSGDGEEQGGRSRNRNRSRNRGRGQN
GNGQGGEQQPQQQQPQTAPAEDEGGNGRNRQRNKRRGGAPTDEFDTEIGEDDVLVPIAGI
LDVLDNYAFVRTTGYLAGPSDVYVSLGQVKKYNLRKGDAIVGSIKQPREGEQQGRQKYNA
LVKVDSINGLSIDDAATRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGL
IVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPEEVTDMERTVKGEVIASTFDRP
AEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLAAPASGRVLSGGVDASALY
PPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIF
PAVDVNASSTRREEMLLSTDEVKITWKLRRALAGLDQQQALEVVLGKLRETHSNVEFLVQ
MQKSIPTLPSGAHGHDNNIR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atcgcgcgcagcacccgttgtgcgcgtgccgctcatgtccccgagaccaaagagggagta
ctcgtggagaatttctccgagacccagaacgaccaggcggcacccgccgccgaggctgcg
gcgaaggccgcgagctccgacgccgcgacgaccgccgcgaccgaggtcgcaccggcccgc
aagcgcgctccgcgccgtgcgagcaccgcgaccgccgccgcgaaggctgagaaggccgag
aaggccgcagcatccaccgacagcgcaccggccaccgaggctcccgcagccgaggcaccc
gccgccgacgcggcacccaaggcgaaggcccctcgccgcagccgtgcgaagaaggctgac
gcagagaacgctgagtctcctgcggcgaccgccgaggctcctgcagcctccgcgccggca
cccgccgaatccaccgaggctcccgcagcgaagaccgcagagtccaacggctccgcggac
gccggttccgcagaggcgggttctgccgacgagccgaagaagaccaccggtcgcggacgc
cgcacggcgaagaagcctgctgccgaggccgagactcccgcagccgagaagcccgctgac
gccgcaccggccgaggcagcacccgcggcggactcctcctctgattccggcgacggcgaa
gagcagggcggtcgcagccgcaaccgcaaccgcagccgtaaccgcggacgcggccagaac
ggcaacggccagggcggcgagcagcagccccagcagcagcagccgcagacggcacccgcc
gaagacgagggcggcaacggccgcaaccgtcagcgcaacaagcgccgcggcggcgcgccg
acggacgagttcgacaccgagatcggcgaggacgacgtcctcgtcccgatcgccggaatc
ctcgacgtgctcgacaactacgccttcgtccgcacgaccggatacctcgccggccccagc
gacgtctacgtgtcgctcggacaggtcaagaagtacaacctccgcaagggcgacgcgatc
gtcggctcgatcaagcagccccgcgagggcgagcagcagggccgccagaagtacaacgcg
ctggtgaaggtcgactcgatcaacggcctgtcgatcgacgacgccgcgacccgtgtggag
ttcggcaagctcacgccgctctacccgcaggagcgtctgcgcctcgagacggcgcccgag
aagctcacgcagcgcatcatcgatctcgtggccccgatcggcaagggacagcgcggcctc
atcgtcgcgccgcccaaggccggcaagacgatcgtcctgcagcagatcgccaacgcgatc
gcgcagaacaaccccgaggttcacctcatggtcgtgctcgtcgacgagcgtcccgaagag
gtcaccgacatggagcgcacggtgaagggcgaggtcatcgcctcgaccttcgaccgtccg
gcagaagaccacaccacggtcgccgagctcgccatcgagcgcgccaagcgtctcgtcgag
ctgggccgcgacgtcgtcgtgctgctcgactcgatcacccgcctcggccgtgcgtacaac
ctcgctgctccggcatccggacgggtgctctcgggtggcgtcgacgcctcggcgctgtac
ccgcccaagcgcttcttcggtgctgcgcgcaacatcgagaacggcggatccctgacgatc
ctcgccacggcgctggtcgagaccggctccaagatggacgaggtgatcttcgaggagttc
aagggcaccggcaacagcgaactgcgcctgtcgcgccagctcgccgacaagcgcatcttc
ccggccgtcgacgtcaacgcgtcgagcacccgccgcgaagagatgctgctgtcgaccgac
gaggtcaagatcacctggaagctgcgtcgcgcccttgcaggcctcgaccagcagcaggcg
ctcgaggtcgtcctgggcaagctcagggagacccactcgaacgtcgagttcctcgtgcag
atgcagaagtcgattccgacgctcccctcgggtgcgcacggacacgacaacaacatccgc
tga
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