Microbacterium sp. 1.5R: BMW26_08015
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Entry
BMW26_08015 CDS
T04912
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
micr
Microbacterium sp. 1.5R
Pathway
micr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMW26_08015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micr03019
]
BMW26_08015
03009 Ribosome biogenesis [BR:
micr03009
]
BMW26_08015
Enzymes [BR:
micr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMW26_08015
Messenger RNA biogenesis [BR:
micr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMW26_08015
Ribosome biogenesis [BR:
micr03009
]
Prokaryotic type
rRNA helicases
BMW26_08015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
APH44910
UniProt:
A0AAC9K4V0
LinkDB
All DBs
Position
complement(1705656..1707500)
Genome browser
AA seq
614 aa
AA seq
DB search
MTPEDAVPTDAPETPGFEELGITGPVLKAIKDLGYETPSPIQAATIPTLLSGRDVVGMAQ
TGTGKTAAFALPVLERLDVSQKTPQALVLAPTRELALQVCEAFESYASKMKGVHVLPVYG
GQGYGVQLSALRRGVHVIVGTPGRIMDHLAKGTLDLSQLQYLVLDEADEMLKMGFAEDVE
QILAQTPEEKQVALFSATMPPQIRRLAQKYLREPEEISIKSKTATGTNITQRYLVVSYAQ
KVDALTRILEVENFDGMIVFVRTKNETETLAEKLRARGYSAAAINGDVPQVQRERSVNQL
KASKLDILVATDVAARGLDVERISHVINFDIPTDTESYVHRIGRTGRAGRTGDAISFITP
RERYLLKSIEKATRQQPTQMQLPSLDDVNTTRLARFDDAITTALSDSTRIEKFRDIIDHY
VRNHDVPEADVAAALAVVAQGDTPLLLDPADDALSKAVEYDNRPPRESNTRERRETREPR
ERRGRGDYKPYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAINIRPDFTVVELPANLD
SSVLEKLKDTRISGRLIEIKPDRGPGARRNDGPRDGARGGFERRDDRPRYDRDDRPARTD
ERGEKPFRKPRHKG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctgaagacgctgtgcccaccgacgcccccgagacccctggattcgaggagctc
ggcatcaccggccccgtcctcaaggccatcaaggacctcggctacgagaccccctccccc
atccaagccgccacgatcccgaccctgctctccggtcgcgatgtcgtcggtatggcgcag
accggaacgggaaagaccgcggcattcgcgctccccgtgctcgagcgcctcgacgtgtcc
cagaagaccccgcaagctctcgtgctggctccgacccgcgagctcgctctgcaggtgtgc
gaggcgttcgagtcgtacgcctcgaagatgaagggcgtccacgtcctccccgtctacggc
ggacagggctatggcgtgcagctgtcggcgctgcgccgcggcgtgcacgtgatcgtcggc
acccccggtcgcatcatggaccacctcgccaagggcaccctcgacctgtcccagctgcag
tacctggtgctcgatgaagccgacgagatgctcaagatgggcttcgccgaagacgtcgag
cagatcctcgcgcagacgcccgaggagaagcaggtagccctcttctcagcgacgatgccc
ccgcagatccgccgactcgcgcagaagtacctgcgtgagcccgaagagatcagcatcaag
tcgaagaccgccaccggcaccaacatcacgcagcggtacctcgtggtgtcgtacgcgcag
aaggtggatgcgctcactcgcatcctcgaggtcgagaacttcgacggcatgatcgtgttc
gtccgcacgaagaacgagaccgagacgctggccgagaagctgcgtgcccgcggatactcc
gccgccgccatcaacggcgacgtgccgcaggtccagcgtgagcgcagcgtcaaccagctc
aaggcgagcaagctcgacatcctcgtcgcgaccgacgtggccgctcgcggtctcgacgtc
gagcgcatcagccacgtcatcaacttcgacatccccaccgacaccgagtcgtacgtgcac
cgcatcggccgcaccggccgcgcgggacgcaccggagacgcgatcagcttcatcaccccg
cgtgagcgctacctgctcaagtcgatcgagaaggccacgcgtcagcagcccactcagatg
cagctgcccagcctcgacgacgtgaacaccacgcgcctcgcccgcttcgacgacgcgatc
acgaccgcgctcagcgatagcacccgcatcgagaagttccgcgacatcatcgaccactac
gtgcgcaaccacgatgtgcccgaggccgatgtcgcagctgcgctcgctgtcgtcgcccag
ggcgatactcctctgctgctcgacccggccgacgacgccctgtcgaaagcggtcgagtac
gacaaccgtccgccgcgcgagagcaacactcgcgagcgtcgcgagacccgcgaaccgcgc
gagcgccgtgggcgcggcgactacaagccgtaccgcatcgaggtcggacgccgtcaccgc
gtcgagccccgtcagatcgtcggcgcactcgcgaatgagggcggcctgggtcgtgatgac
ttcggcgcgatcaacatccggccggacttcactgtcgtcgagttgccggcgaacctcgat
tcgtccgtcctggagaagctgaaggacacccgcatctcgggtcggctcatcgagatcaag
cccgaccgtgggcctggagcccgtcgtaacgacggccctcgtgacggcgcccgcggtggg
ttcgagcgccgcgatgaccgtccgcgctacgaccgtgacgaccgtcctgctcgcaccgat
gagcgaggcgagaagccgttccgcaagccccgacacaagggctga
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