Microbacterium sp. 1.5R: BMW26_08940
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Entry
BMW26_08940 CDS
T04912
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
micr
Microbacterium sp. 1.5R
Brite
KEGG Orthology (KO) [BR:
micr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micr03016
]
BMW26_08940
Enzymes [BR:
micr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BMW26_08940
Transfer RNA biogenesis [BR:
micr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMW26_08940
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
APH45065
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Position
1887595..1888788
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AA seq
397 aa
AA seq
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MTEYSVISDVSEFHAACAALAAGTGPVAVDVERASGFRYSQRAYLVQVFRRDAGVFLFDP
PALGDFSPLQQAIGDALWVFHAASQDLPSLRELDLLPHTIFDTELASRLLGHDRVGLAAV
VENTLGITLKKEHSAADWSTRPLPAAWLEYAALDVLHLIDVYEALEAELEEQGKTEYAAE
EFAATLARLPKPPREDPWRRLSGLHQVRGARNLAVARSLWQARESFAQDQDVSPGRLVPD
RSLIAAVLANPQSKQALAGIKEFQGRASRTQLDRWWQAMVDGRATEELPRERVPSDTLPP
PRAWSDRNPEADARLKAARPVVEATAEELGMPTENLLTPDHLRRVAWDVPGTTPEAIGEA
LAALGARPWQIAQTAQKIADAFVEAAQTPDEASAPAS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatactccgtgatctccgacgtctcggagttccacgcggcatgcgccgcactg
gccgcaggaactgggcctgtcgccgtggacgtcgagagggcatccggattccgctactcc
cagcgcgcctatctcgtgcaggtgttccgccgcgacgcgggggtcttcctgttcgaccct
cccgctctcggcgacttcagccctctgcagcaggccatcggcgacgccctgtgggtgttc
cacgccgccagccaggatcttccgtctctgcgcgaactcgatctgctcccccacacgatc
ttcgacacggagctcgcatcgcgactgctgggtcatgaccgagtcggactcgccgcggtc
gtcgagaacacgctcggcatcacgctcaagaaggagcactccgcggcggactggtcgacc
agaccccttcccgctgcatggctcgagtacgcggcactcgatgtgctgcacctcatcgac
gtctacgaggctctggaggcggagctcgaggagcaggggaagaccgagtacgcggccgag
gagttcgccgccacgctcgcccgactgccgaagcctcctcgcgaagacccctggcgacga
ctcagcggactgcaccaggtgcgcggcgcgcggaacctcgcggtcgctcgctcgctgtgg
caggctcgcgagagcttcgcccaggatcaggacgtctctcccggccgtctggtgccggac
cggtcgctcatcgcggccgtgctggcgaacccgcagagcaagcaggcgctcgcggggatc
aaggagttccagggccgagcgagccgcacccagctcgaccgctggtggcaggcgatggtc
gacggacgtgccacggaggagcttcccagggagcgggttcccagcgatacgctgccgccg
ccgcgagcctggtccgatcgcaatccggaggccgacgcgcgactcaaagccgcccgcccg
gtcgtcgaggccacggccgaggaactcgggatgccgaccgagaacctgctcacccccgat
cacctgcgccgtgtggcgtgggatgtaccgggaacgacgcccgaggccatcggcgaggca
ctcgccgcactgggtgcccgcccgtggcagattgcacagactgcacagaagatcgcggac
gcctttgtagaggcggcgcaaacgcccgacgaggcgtccgcaccggcttcgtag
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