Microbacterium sp. SGAir0570: C1N74_06040
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Entry
C1N74_06040 CDS
T07987
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mics
Microbacterium sp. SGAir0570
Pathway
mics03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mics00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N74_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mics03400
]
C1N74_06040
DNA repair and recombination proteins [BR:
mics03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N74_06040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1N74_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
AAA_25
DnaJ_CXXCXGXG
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QCR40028
LinkDB
All DBs
Position
1283677..1286562
Genome browser
AA seq
961 aa
AA seq
DB search
MPIVPVASSSKLSVRGARVHNLKDVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIHDYMRLLW
ARIGVPHCPECGERIQRQTVQQIADQLMELPERTRYQVVAPVVTQKKGEFVDLFKELSAK
GYARAVVDGDVVSLAEPPTLKKSYKHDIAVVVDRLVAGPDLLGRVTDSVETALALAGGVI
KINFVDEEGDAAWQSFSEKLACPNGHALQLTEIEPRTFSFNAPFGACPTCSGLGTRMSVD
PELMLGDEELSIAEGVLLPWTTQGKGLFQYYERLLEGLASDLKFSLKTPWRDLPGDVQDA
VLRGENYKVTVKWKNRYGREMRYASGFEGVIPYIERQYLQAETDTQRQRWAEYLREVPCP
ACDGDRLKPEVLAVLVHERSIADVARLSLAEAQTYFNQLELTEREAKIAAAVLREIRARL
DFLIEVGLNYLSLGRAAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IDTLVKLKNLGNTLIVVEHDEETIAAADWVVDIGPRAGVEGGNVVHSGPYDALLADENSM
TGDYLSGRRSLETPTKRRKIDKKRMLTVVGARANNLKNVTAEFPLGVLTSVTGVSGSGKS
TLVNGILYEVLATRLNGARRVAGKHTRVTGLDNLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRTLFSETPEAKVRGYLPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVDCEVCHG
KRYNRDTLAVHYKGKNIAEVLEMPISEAAEFFEPIQAIHRYLKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLATELQRRSNGRSIYVLDEPTTGLHFEDVRKLLEVLNGLVDKGNTVITI
EHNLDVIKASDWIIDLGPEGGAGGGTIVATGTPEQVAGVAESHTGQFLAEILGAPAARKA
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgtccccgtcgcttcctcatcgaaactcagcgtccgcggagcccgcgtccac
aacctcaaggacgtcgatctcgacattccgcgcgacagtctcgtcgtcttcaccggcctc
tccggctcgggaaagtcgagcctcgccttcgacacgatcttcgccgagggtcagcgccgc
tacgtcgagtcgctgagcgcctacgcgcgccagttcctcggtcaggtcgaccgtcccgac
gtcgacttcatcgagggcctcagcccggcggtctcgatcgatcagaagtcgacgaaccgc
aacccccggtcgaccgtcggcacgatcaccgagatccacgactacatgcgcctgctctgg
gctcgcatcggcgttccgcactgccccgagtgcggtgagcggatccagcgtcagacggtc
cagcagatcgccgaccagctgatggagctccccgagcgcacccgttaccaggtcgtggcg
cccgtggtgacgcagaagaagggcgagttcgtcgacctcttcaaggagctgagcgcgaag
ggctacgcccgcgccgtcgtcgacggcgacgtcgtctcgctcgccgagccgccgacgctg
aagaagagctacaagcacgacatcgcggtggtggtcgaccggctcgtggccggccccgac
ctgctcggacgcgtcaccgactccgtcgagaccgcgctcgcgttggccggaggcgtcatc
aagatcaacttcgtcgacgaagagggcgacgccgcgtggcagagcttcagtgagaagctc
gcctgccccaatgggcacgccctgcagctcaccgagatcgagccgcgcacgttctcgttc
aacgcacccttcggtgcgtgccccacgtgctccggtctcggcacccggatgtcggtcgac
ccggagctcatgctgggcgacgaggagctctccatcgccgagggcgtcctgctgccgtgg
acgacgcagggcaaggggctcttccagtactacgagcgcctcctcgaggggctcgcatcc
gacctgaagttctcgctcaagactccgtggcgcgacctccccggcgacgtgcaggatgcg
gtgctccgcggagagaactacaaggtcaccgtcaagtggaagaaccgctacgggcgcgag
atgcgttacgcctccgggttcgagggcgtcatcccgtacatcgagcgtcagtatcttcaa
gccgagaccgacacgcagcgtcagcgctgggccgagtacctgcgcgaggtcccgtgcccc
gcatgcgacggcgaccggctcaagccggaggtgctcgccgtcctcgtccacgagcgctcc
atcgccgacgtcgctcggctgagcctcgccgaggcgcagacgtacttcaaccagctcgag
ctcacggagcgcgaggccaagatcgccgcggcggtgctgcgtgagatccgcgctcgcctc
gacttcctcatcgaggtcgggctgaactacctgagcctgggccgcgcagccgggtcgctc
tcgggcggcgaggcgcagcgcatccgactcgcgacgcagatcggttcgggcctcaccggg
gtgctctacgtcctcgatgagccgtcgatcggactccaccagcgcgacaaccggcgattg
atcgacaccctcgtcaagctcaagaacctcggcaatacgctcatcgtcgtcgagcacgac
gaagagacgatcgccgcagccgactgggtggtcgacatcggcccgcgcgccggtgtcgag
ggcggcaacgtcgtgcactccggcccctatgatgctctgctcgccgacgagaactcgatg
accggcgactacctgtcggggcggcgctcgctcgagacgccgaccaagcgtcgcaagatc
gacaagaagcggatgctgaccgtcgtcggcgctcgtgccaacaacctgaagaacgtcacg
gccgagttcccgctcggcgtgctgacctccgtcacgggtgtgagcggctcgggcaagtcc
acgctggtcaacggcatcctctacgaagtgctcgcgactcgtctgaacggcgcgcgacgc
gtcgcgggcaagcacacgcgtgtcaccggactcgacaacctcgacaaggtcgtccacgtc
gaccaggcgccgatcggccggacaccgcgctcgaacccggccacctatacgggcgtcttc
gaccgcatccgcaccctgttcagcgagacgcccgaggcgaaggtgcgcgggtacctgccc
ggccgtttctcgttcaacgtcaaggggggccgctgcgaggcgtgctcgggcgacggcacg
ctgaagatcgagatgaacttcctgcccgacgtctacgtcgactgcgaggtgtgccacggc
aagcgctacaaccgcgacaccctggccgtgcattacaagggcaagaacatcgccgaggtc
ctcgagatgcccatctcggaggcggcagagttcttcgagccgatccaggcgatccaccgc
tacctgaagactctcgtcgacgtcgggctcggttacgtccggctcggtcagtcggccacg
acgctgtcgggcggggaggcgcagcgtgtcaagctcgcgacggagctccagcgccgctcg
aacggccgaagcatctacgtgctcgacgagcccacgaccggtctgcatttcgaagacgtc
cgcaagctcctcgaggtcctcaacggcctcgtcgacaagggcaacaccgtcatcacgatc
gagcacaacctcgacgtgatcaaggcctccgactggatcatcgacctcggtcccgaaggt
ggagccggcggcggcacgatcgtggcgaccggcacgcccgagcaggtcgcgggtgttgcc
gagagtcacaccggccagttcctcgccgagatcctgggggccccggcggcgcgcaaggcg
ggctga
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