Microbacterium sp. SGAir0570: C1N74_07475
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Entry
C1N74_07475 CDS
T07987
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mics
Microbacterium sp. SGAir0570
Pathway
mics03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mics00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1N74_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mics03400
]
C1N74_07475
Enzymes [BR:
mics01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1N74_07475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1N74_07475
DNA repair and recombination proteins [BR:
mics03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1N74_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_Tnp_IS91
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCR40272
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Position
1572453..1573349
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AA seq
298 aa
AA seq
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MPELPEVEVVRAGLEPAVVGARIEACTVLDARALTRHAGTRESFERELIGRSLAAAARRG
KFLWFPVADTDRAVVAHLGMSGQMLLREPGAPTERHERIRWDIVHPAHGELSVLFVDQRT
FGSLAVDDLEPTADGAAGGRGTDAALIPGQVRHIARDPLDPAFDAARFHRELARRSSGIK
RVLLDQGVVSGIGNIYADEALWAARIHPETAASLLSRPARERLLEAVVAVMTKALAEGGT
SFDAQYVNVNGQAGYFAHSLEAYGRTGAECSRCGSAIVRVAFTNRSSHYCPRCQRRRY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaagtcgaggtcgtccgtgccggtctcgagccggccgtcgtcggc
gcgcgcatcgaggcctgcacggtcctcgatgcgcgcgcgctcacgcgccacgccgggacg
cgggagtctttcgagcgggagctgatcggccgctcgcttgccgcggccgcgcgccgcggc
aagttcctgtggttccccgtggcggacacggatcgcgcggtggtcgcccacctggggatg
agcgggcagatgctcctgcgcgagccgggcgcccccaccgagcgtcatgaacggatccgc
tgggacatcgtgcaccccgcgcacggcgagctgtccgtgctcttcgtcgatcagcggact
ttcggatccctggccgtcgacgacctcgagccgaccgcggatggcgccgcgggcgggcgc
ggaacggatgctgccctgatcccgggacaggtgcggcacatcgcccgtgatcccctcgac
cccgcgttcgacgccgcgcgcttccatcgagagctggcgcggcggtcgtcgggcatcaag
cgcgttctgctcgatcagggcgtggtcagcggtatcggcaacatctacgccgacgaggcg
ctgtgggcggcccgcatccacccggagaccgcggcatctctcctctcgcgccccgcgcgc
gaacgcctcctggaagcggtcgtcgcggtcatgacgaaggctctcgccgagggcggcacg
agcttcgacgcgcagtatgtgaacgtcaacggccaggccggctacttcgcccactctctg
gaggcctacggccgcaccggagcggagtgctcgcgatgcggctcggccatcgtccgggtc
gcgttcaccaatcggtcatcgcactactgtccgcgctgccagcgtcgccgctactga
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