Microbacterium sp. SGAir0570: C1N74_08150
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Entry
C1N74_08150 CDS
T07987
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mics
Microbacterium sp. SGAir0570
Pathway
mics03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mics00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N74_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mics03019
]
C1N74_08150
03009 Ribosome biogenesis [BR:
mics03009
]
C1N74_08150
Enzymes [BR:
mics01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C1N74_08150
Messenger RNA biogenesis [BR:
mics03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1N74_08150
Ribosome biogenesis [BR:
mics03009
]
Prokaryotic type
rRNA processing factors
C1N74_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
LPP
Motif
Other DBs
NCBI-ProteinID:
QCR40392
LinkDB
All DBs
Position
1702361..1704775
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AA seq
804 aa
AA seq
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MADDRNDNPTPDESENAVDPAAAELADAVTSIDATEEHIDSGRAAEDDAPEPAAGADESA
AAPDEPVPAEESSPAQEEVRGEEQAPAPQPEPAEEPAPAEEPAPAEEPAPAEEPAPAEEA
ADAGPPTAVSLGLLPAEFVSAVSTALHFYAPEIPPLPALPDDVEDDDSASSSGSSSSRRR
GRRRGGSNGDEGNEPAPRQRAVELITEPQRIKGSTRLEAKKQRRRDGREAGRRRTVVTEA
EFLARREAVDRVMIVRSKNGRIQIAVLEDNVLVEHYVARNQDASLIGNVYLGRVQNVLPS
MEAAFVDIGRGRNAVLYSGEVDWDAVETGNQPRRIELALKSGDRVLVQVTKDPVGHKGAR
LTSQISLPGRYLVYVPGGAMNGISRKLPDTERARLKRILKEVLPESSGVIVRTAAEGATE
DQLTRDVQRLTSQWEHISSQLEKIQAPALLHSEPDLLVKIVRDVFNEDFSRMLIQGDEAY
STITSYLTGVAPDLLERVEKYEDEQDPFDAFRVTEQIEKALDRKVWLPSGGSLVIDRTEA
MTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRD
LVLRRLIECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLETFSEACEVCAGRGVIVHHD
PVVKHRGAGSQNGNGNGSARRNGRGGGNAAPAPANGGTHVITEGAKSALAQIAASTIQAT
AAEEDAEIITVPVEAESAPVERPKKPRRKKAEPKAPRTEKDLLLDSVLNALPEPKAPGQG
RGRRRVTTAALSGTPVSAAPASDD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatcgcaatgacaacccgacccccgatgagtccgagaacgcggtagacccc
gccgcggccgaactggccgatgccgtgacgtcgatcgacgccaccgaggagcacatcgac
agcggacgggcagccgaggacgatgccccggagcccgctgccggcgccgatgagtcggcc
gccgctcccgacgagcccgtgcctgctgaggagtcctccccggcgcaggaggaggtccgt
ggggaagagcaggctcccgctccgcagcccgagcccgcggaggaacccgcccccgcagaa
gagcctgcccccgccgaggaacccgcccccgcagaggaacccgcccccgccgaagaggcg
gcggacgccggccctccgaccgcggtctcgctcggtctcctgcccgccgagttcgtctcc
gcggtatccaccgcgctgcatttctacgctcccgagatcccgccgcttccggcgctgccg
gacgacgtcgaggacgacgactccgcgtcctcatcgggctcgagcagctcgcgccgtcgc
ggccgccgccgcggcgggtcgaacggcgatgagggcaatgagcctgctccgcgccagcgc
gcggtggagctcatcaccgaaccgcagcgcatcaagggctccacccggctcgaggcgaag
aagcagcgccgccgcgacggccgcgaagcgggtcgtcggcgcaccgtcgtgaccgaagcc
gagttcctcgcccgccgcgaggcggtcgaccgggtcatgatcgttcgatccaagaacggt
cgcatccagatcgccgtcctcgaggacaacgtgctcgtcgagcactacgtcgcgcgcaac
caggatgcctcgctgatcggcaacgtgtacctcgggcgcgtgcagaacgtgctcccgagc
atggaggccgccttcgtcgacatcggccgtggtcgcaacgccgtgctctactccggcgag
gtcgactgggatgccgtcgagacgggcaaccagccgcgccgcatcgagctcgcactcaaa
tccggcgaccgcgtcctcgtccaggtcacgaaggatccggtcgggcacaagggtgcgcgc
ctgacgagccagatctcgctccccggccgctacctcgtgtacgtcccgggcggcgcgatg
aacggtatctcgcgcaagcttcccgacaccgaacgggcgcgtctcaagcgcatcctcaag
gaggtcctccccgagtcgtcgggcgtcatcgtgcgcaccgccgcggagggcgcgacggaa
gaccagctcacgcgagacgtgcagcggctcacctcgcagtgggagcacatcagctcgcag
ctcgagaagatccaggctcccgcgctcctgcactccgagcccgaccttctcgtgaagatc
gtccgcgacgtcttcaacgaggacttctcgcgcatgctgatccagggcgacgaggcctac
tcgacgatcacgtcgtacctcacgggagtcgcgcccgatctcctcgagcgcgtcgagaag
tacgaggacgagcaggaccccttcgacgcgttccgggtcacggagcagatcgagaaggcg
ctggatcgcaaggtgtggctgccctcgggcggttcgctcgtgatcgaccgcaccgaggcg
atgaccgtggtggatgtgaacacggggaagttcgtcggatcgggcggcaatctcgaggag
accgtcaccaagaacaacctcgaggccgccgaggagatcgtccggcagctgcgcctgcgg
gacatcggcggcatcatcgtcgtcgacttcatcgacatggtgctcgagtccaaccgcgat
ctcgtgctgcggcgtctgatcgaatgcctgagccgtgaccgcacgaagcaccaggtcgcc
gaggtcacctcgctgggtctggtccagatgacgcgcaagaagctgggcctcgggctcctg
gagaccttcagcgaggcgtgcgaggtgtgcgccggccgcggcgtcatcgtccaccacgat
ccggtggtcaagcaccgcggcgccggctcgcagaacggcaacggcaacggttcggcgcgc
cgcaacggccgtggcggcggtaacgcggctcccgcgcccgcgaacggcggcacccacgtc
atcaccgagggcgcgaagtcggcactcgcccagatcgccgcgtcgacgatccaggcgact
gctgcggaggaggacgccgagatcatcaccgtcccggtggaggcggagtccgcacccgtc
gagcgcccgaagaagccacggcgcaagaaggccgagcccaaggcgccgcgaaccgagaag
gacctgctcctcgactcggtgctcaacgcgctccccgaacccaaggctcccggtcagggc
cgcggacgtcgccgcgtgacgaccgccgccctcagcggcaccccggtatcggcggcgccg
gcctcggacgactga
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