Microbacterium sp. SGAir0570: C1N74_08780
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Entry
C1N74_08780 CDS
T07987
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mics
Microbacterium sp. SGAir0570
Pathway
mics03420
Nucleotide excision repair
mics03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mics00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N74_08780
03430 Mismatch repair
C1N74_08780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mics03400
]
C1N74_08780
Enzymes [BR:
mics01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N74_08780
DNA repair and recombination proteins [BR:
mics03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N74_08780
MMR (mismatch excision repair)
Other MMR factors
C1N74_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DUF3107
Motif
Other DBs
NCBI-ProteinID:
QCR40505
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All DBs
Position
complement(1839150..1840904)
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AA seq
584 aa
AA seq
DB search
MTDPLAGLDEQQREAASALRGPVCVLAGAGSGKTRVITHRIAHGVETGAYSPNRVMAVTF
TAKAAGEMRGRLRALGVGGVAARTFHSAALAQLNYFWPQLAGDAAPTILGSKVRLLAQAA
DAIGLDPDPAVLRDVATRIEWRKITMRSIERYALDRPEPVGSLSLDAVVALQRSYEQVKD
ERRQLDFEDVLLACAGMLEAEPRVLAEVREQYRHFTVDEFQDVSPVQHRLLELWLGERRD
LCVVGDASQTIYSFAGADPSYLLEFGTRHPDARILRLERNYRSEAGVVAVANALMRGRPG
ALELTADRATPDHPRPTIRAFADDTAEADGVAEAVAEQLARGIDPRHIAVLYRVNAQSAP
LLAALARRGIAAAVLGGARFFDIPEVRQAVMALRGASVAPSSGDLVADVRSILRSLGLSD
EPPPAGGPLRDAWEARAALLRLAEEAPAGTTMRAFTDELQVRAKDQHEIATRTVTLSTLH
AAKGLEWDHVHLVGLAEGLLPIAYATTFEQIDEERRLAYVGVTRAARTLTLSWARTSGRY
ERQVSRFVREIGTSTLDEVRGRATSARRTTPAASSTGSAPSPAR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctctcgccggactcgacgagcagcagcgcgaggcggcctctgcgctgcgc
ggtcccgtgtgcgtgctcgcgggggccgggtcggggaagactcgcgtcatcacccaccgc
atcgcgcacggcgtcgagaccggcgcgtactcgccgaaccgggtcatggcggtcaccttc
acggcgaaagccgcgggggagatgcggggtcgattgcgcgccctgggcgtcggcggcgtc
gccgcgcgcacgttccactccgcggctctggcacagctgaactacttctggccgcagctc
gccggcgacgctgcgccgacgatcctgggaagcaaggtgcggctgctcgcgcaggcggcc
gacgcgatcgggctggaccccgatccggccgtcctgcgcgatgtcgcgacgcgtatcgag
tggcggaagatcacgatgcgttccatcgagcgatacgccctcgacaggcccgaaccggtc
ggctcgctatcgctcgacgcggtggtcgcgctgcagcgctcgtacgagcaggtgaaggac
gagcggcggcagctcgacttcgaggacgtgctgctcgcgtgcgcggggatgctcgaggcc
gagccgcgcgtcctcgctgaagtgcgcgagcagtaccgccacttcaccgtggacgagttc
caggacgtctcgcccgtgcagcaccgcctgctcgagctctggctgggcgaacgccgtgat
ctctgcgtcgtcggtgacgccagccagacgatctattccttcgcgggcgccgacccgtcg
tacctgctggaattcggcacccggcatccggatgcgcggattctgcggctcgaacgcaac
taccgctccgaggcgggcgtcgtcgccgtggcgaacgctctcatgcggggccgccccggg
gctctcgagctcacggccgatcgcgcgacccccgatcatccgcgcccgacgatccgtgca
ttcgccgacgacaccgccgaagcggacggcgtggccgaagcggtcgcagagcagctcgcg
cgggggatcgatccgcgccacatcgccgtcttgtatcgggtgaacgcccagtcggcgccg
ctcctggcggcgctggcgcggcgcggcatcgccgccgcggtgctcggaggcgcacgcttc
ttcgacatccccgaggtgcgccaggccgtgatggccctgcgcggcgcgtccgtggcgccc
tcgtccggcgacctcgtcgccgacgtccggtcgatcctgcgctcgctcggtctgagcgac
gagccgcccccggcgggcggtccgctccgtgacgcctgggaggcgcgcgcggcgctgctc
cgcctcgccgaggaggcgccggcgggtaccacgatgcgggcgttcaccgatgagctgcag
gtgcgggcgaaggatcagcacgagatcgccacgcggaccgtgacgctgtcgacccttcac
gccgcgaagggcctcgagtgggatcacgtccacctcgtgggccttgcggagggactgctg
cccatcgcctacgccacgacgttcgagcagatcgacgaggagcgccgactggcctacgtg
ggtgtcacgcgagctgcgcgaacgttgactctgtcgtgggctcggacctcggggcgctac
gaacggcaggtgtctcgcttcgtccgggagatcggcaccagcacgctggatgaggttcgt
ggtcgtgccacgtcggctcgccgaacgacgcccgcagcgtcatcgaccgggtccgctccg
tcaccggcgcgctga
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