Microbacterium sp. SGAir0570: C1N74_11005
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Entry
C1N74_11005 CDS
T07987
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mics
Microbacterium sp. SGAir0570
Brite
KEGG Orthology (KO) [BR:
mics00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mics03032
]
C1N74_11005 (topA)
03400 DNA repair and recombination proteins [BR:
mics03400
]
C1N74_11005 (topA)
Enzymes [BR:
mics01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1N74_11005 (topA)
DNA replication proteins [BR:
mics03032
]
Prokaryotic type
DNA Topoisomerases
C1N74_11005 (topA)
DNA repair and recombination proteins [BR:
mics03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1N74_11005 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
DUF7589
Motif
Other DBs
NCBI-ProteinID:
QCR40884
LinkDB
All DBs
Position
complement(2307570..2310275)
Genome browser
AA seq
901 aa
AA seq
DB search
MAGGKKLVIVESPTKMKSIQGYLGDEYEVLSSVGHIRDLAKKEDIPADKKQAYGKYSIDV
ENGFDAYYVVSDRKTKTVAELKRALKDADEVLLATDEDREGEAIAWHLLEVLKPKVPVKR
MVFHEITKDAIRAAADNTRELDLALVNAQETRRVLDRLYGWDVSPVLWRKIGSGRDGQAL
SAGRVQSAATRMVVERERERMSFVSASYWDIEAHAAKDGGSFSTRLARLDGAPLARGTDF
DDAGALKKAVVVLSEKDARELATAIEKAATAAVTAVEAKPGTRSPKPPFTTSTMQQEAGR
KLSMSAKHAMSVAQRLYEKGYITYMRTDSTALSAQAVTAARTQAVALYGDRAVPASPRSY
RNNAKNAQEAHEAIRPSGEEFRTPASVASGLDRDEQRLYDLIWKRTVASQMSDAKYETTT
VTLEVDAGGKRAAFTASGTVYTFKGFLEAYEEGNDEKRGDNDRSADQSLPPVAVGDALAL
SDVEPKGHATSPKPRYTEASLVKALEEKGIGRPSTFASIIDVILERGYVTKRGQALVPSW
LSFSVVRLLEQHFSDLVDYDFTAALEDDLDAIARGEQAREAWLKEFYFGSDNHVGLRNIV
ENLGDIDARELNATPIGDVATLRFGKYGPYLDVPVGDGETRIVNVPDDLAPDELTPEKAQ
ELIDAPVAGDRVLGENPENGKLIVVKDGRFGPYVQELEPEPEETVDEATGEVAPAKKKTT
KKKEAAPKPRTASLFKSMSVDTVDLEQALKLLSLPRVVGVDPESGNEITAQNGRYGPYLK
KGTDSRTLASEQQLFDITLEEALAVYAQPKYGARAASSALKEFEADPTSGKPIKLKDGRF
GPYVTDGETNATIPRGENAEEITFERAVQLLADKRAKGPAPKRKTAARKTTTTRKPAAKK
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggcggcaagaaactcgtcatcgtcgagtccccgaccaagatgaagtcgatccag
ggctacctgggcgacgagtacgaagtgctcagctcggtcgggcacatccgggatctcgct
aagaaagaggacatcccggccgacaagaagcaggcgtacggcaagtactccatcgacgtc
gagaacggcttcgatgcgtattacgtggtcagcgatcgcaagaccaagaccgttgccgag
ctcaagcgcgccctgaaggacgccgacgaagtcctgctcgccaccgatgaagaccgcgag
ggcgaggcgatcgcctggcacctgctcgaggtgctcaagcccaaggtccccgtcaagcgc
atggtcttccacgagatcaccaaggacgccatccgcgcggccgccgacaacacccgcgag
ctcgacctcgcgctcgtcaacgcgcaagagacccgccgcgtcctcgaccggctctacggg
tgggatgtctcgcccgtgctctggcgcaagatcggttccggccgcgacggtcaggcgctg
agcgccggccgcgtgcagtccgccgccacccgcatggtcgtcgagcgtgagcgcgagcgg
atgtcgttcgtctcggcgtcgtactgggacatcgaggcccacgcggcgaaggacggcggc
tcgttctcgacgcgcctggcgcggctcgacggtgctccgctggcccgcggcaccgacttc
gatgacgccggcgcgctgaagaaggcggtcgtcgtcctcagcgagaaggacgcccgcgag
ctcgcgaccgcgatcgagaaggcggccaccgcagccgtcaccgcggtcgaggccaagccc
ggaacccgcagccccaagcctccgttcacgacctccacgatgcagcaggaggccggccgc
aagctctcgatgagcgccaagcacgcgatgagcgtcgcccagcgtctctacgagaagggc
tacatcacctatatgcgcaccgactcgaccgcgctctcggcgcaggccgtgacggcggcg
cgcacgcaggcggtcgcgctctatggcgaccgcgcggttcccgctagcccgcgctcctac
cgcaacaacgccaagaacgcccaggaggcccacgaggcgatccgcccctcgggcgaggag
ttccgcacgcccgcatccgtcgcctccggtctcgaccgcgacgagcagcgcctgtacgac
ctcatctggaagcgcaccgtcgccagccagatgtcggacgcgaagtacgagaccacgacc
gtcacgctcgaggtcgacgccggcggcaagcgcgcagcgttcacggcatccggcaccgta
tacaccttcaagggcttcctcgaggcgtacgaagagggcaacgacgagaagcgcggcgac
aacgaccgctccgcagaccaatcgctgccaccggtcgccgtgggcgacgcactcgcgctg
tcggatgtcgagcccaaggggcacgcgacgagcccgaagccccgctacaccgaggcgagc
ctcgtcaaggcgctcgaggagaagggcatcggccgtccgtcgaccttcgcgagcatcatc
gacgtcatcctcgagcgcggctacgtcaccaagcggggccaggcgctcgtgcccagctgg
ctctcgttcagtgtcgtccggctgctcgagcagcacttctccgacctcgtcgactacgac
ttcacggccgcgctcgaggacgacctcgacgccatcgcacggggcgagcaggcgcgcgag
gcgtggctgaaggagttctacttcggctcggacaaccacgtgggcctgcgcaacatcgtc
gagaacctcggcgacatcgacgcccgcgagctgaacgcgacgcccatcggcgacgtcgcg
acgctgcggttcggcaaatacggcccgtacctcgacgttccggtcggtgacggcgagacg
cgcatcgtcaacgtgcccgacgacctcgcgcccgacgagctgacgcccgagaaggcgcag
gaactcatcgacgctcctgtcgccggcgaccgcgttctcggcgagaaccccgagaacggc
aagctcatcgtcgtcaaggacggacgcttcggtccctacgtgcaggagctcgagcccgag
cccgaggagaccgtcgacgaggcgaccggcgaggtcgcccccgccaagaagaagacgacc
aagaagaaggaagcggctcccaagccgcgcaccgcgtcgctgttcaagtcgatgagcgtc
gacacggtcgacctcgagcaggcgctcaagctgctgtcgcttccccgcgtcgtgggcgtc
gaccccgagtcgggcaacgagatcacggcccagaacggccgctacggtccgtacctgaag
aagggcaccgactcgcgcaccctcgcgagcgagcagcagctgttcgacatcacgctcgag
gaggccctcgccgtctacgcgcagcccaagtacggggctcgcgccgcatcgagcgcgctc
aaggagttcgaggccgaccccaccagcggcaagccgatcaagctgaaggacggccgcttc
ggtccctatgtcaccgacggtgagaccaacgcgacgatcccgcgcggtgagaacgccgaa
gagatcacgttcgaacgcgccgttcagctgctcgccgacaagcgcgccaagggccccgcg
cccaagcgcaagacggcggcgcgcaagaccacgacgacgcgcaagcccgcggcaaagaag
aagtga
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