Microbulbifer sp. THAF38: FIU95_00295
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Entry
FIU95_00295 CDS
T06274
Symbol
polA1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03030
DNA replication
mict03410
Base excision repair
mict03420
Nucleotide excision repair
mict03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU95_00295 (polA1)
03410 Base excision repair
FIU95_00295 (polA1)
03420 Nucleotide excision repair
FIU95_00295 (polA1)
03440 Homologous recombination
FIU95_00295 (polA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mict03032
]
FIU95_00295 (polA1)
03400 DNA repair and recombination proteins [BR:
mict03400
]
FIU95_00295 (polA1)
Enzymes [BR:
mict01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU95_00295 (polA1)
DNA replication proteins [BR:
mict03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIU95_00295 (polA1)
DNA repair and recombination proteins [BR:
mict03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIU95_00295 (polA1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU95_00295 (polA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
WHD_BrxR
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QFT53019
LinkDB
All DBs
Position
70017..72944
Genome browser
AA seq
975 aa
AA seq
DB search
MRLLRRLLSTQRRGELALPQGSVAAVNVLSHGSERKNCVKGGILSANPALRAPDRTNNRI
PRFMTKQSSPAAPLILVDGSSYLYRAFHALPPLTTSQGKPTGAVRGVISMLRRHLKEHPH
SPVVVVFDAKGKTFRDEMFAEYKSHRPPMPDDLREQIQPIHDIIDAMGLPRLVVDGVEAD
DVIGTLALEAQRQGQEVIISTGDKDMAQLVCPGVTLVNTMSNTEMDSEGVVKKFGVGPEL
IIDFLALMGDKSDNIPGVPGVGEKTALALLQNLGSLENIYADLDAIAPLGFRGAKTLGKK
MAEHREAAELSYKLATIKTDVEMPYHPQELHNAQPNNEALIELFTQNEFRGWLEELTSEE
SEEAMAEAVERDYVIVTEMAEFDTWLEQLKASEIFAFDTETTSLNYMQAKLVGVSFAVEP
YRAAYVPLAHDYMGAPEQLPFDEVLAKLKPLLEDDKQKKVGQNLKYDSHILASYGIALRG
IARDTMLESYVLDSTGSRHDMDSLALKYLGEHTVHFEDIAGKGAKQLTFNQIELDKAGPY
AAEDADITLRLHNELSARLQRERSLQEVLDDIEMPLLPVLARMERNGAYIDAKMLSEQSA
ELEQKMRELEQKAYEVAGEEFNLGSTKQLGVILFEKLQIPVIKKTPKGAPSTAEAVLQEL
AHNHELPALIMQYRGLAKLKNTYTDKLPKMIDPSSGRVHTSYHQAVAATGRLSSSDPNLQ
NIPIRTEEGRRIRRAFTADPRINGGSEIIAADYSQIELRIMAHLSGDKGLVDAFAHGADI
HRATAAEVFEVALDAVSDEQRRRAKAINFGLIYGMSAFGLAKQLDIPRADAQTYIDRYFE
RYPGVLRYMEDTRKQAAEKGYVETLFGRRLYLPEINSRNGMQRQAAERTAINAPMQGTAA
DIIKRAMIAVDAWLKEQKLSTKLIMQVHDELVLEVPKDEVETVAGGVQEIMQGAAKLHVP
LIVDLGRGKNWDEAH
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttactgcgtcgattgttgtcgacccagcgtcgaggtgagttggctttgccgcaa
ggatctgtggcggcggtaaatgttttgtctcacggcagcgagcggaaaaactgtgtaaag
gggggtatcctatcggccaatccagcgctgcgagcgcccgacaggaccaacaacagaatc
ccgagatttatgactaaacaaagctcccccgccgccccgctgatcctggtggatggctcc
tcctacctgtatcgcgcttttcacgctctgccaccgctgactaccagccagggcaaaccc
accggcgcggtgcgcggtgtcatcagcatgctgcgccgccatttgaaggagcatccgcac
agcccggtggtagtggtgtttgatgccaagggcaaaaccttccgcgatgaaatgtttgcc
gagtacaagtcccatcgcccgccgatgcccgatgacctgcgcgaacaaattcagccgatc
catgacattatcgatgccatggggctgccgcgtctggtggtggatggggtcgaagcggac
gatgtgatcggcaccctggccctggaagcccagcgtcagggccaggaagtgattatctcc
actggcgataaagatatggcgcagctggtgtgccctggcgtcactctggtcaataccatg
tccaatactgagatggacagcgagggggtggtgaaaaaattcggcgtggggccggagttg
attatcgacttcctcgccttgatgggggacaagtccgacaatattcccggtgtcccgggg
gtaggtgaaaagaccgctctggcgctgctgcaaaatctgggcagtctcgagaatatctac
gcagacctggatgccattgcgccgctgggattccgcggtgccaagaccctcggtaagaag
atggccgaacaccgcgaggcggcggaactctcctataaactggccaccattaagaccgat
gtggagatgccctatcacccgcaggagctgcataacgcgcagcccaataacgaggcattg
atagagctgttcactcagaatgaattccgcggctggctggaagaactgaccagtgaagag
tccgaagaggcgatggccgaggccgttgagcgggactacgtcatcgtcaccgagatggca
gaattcgacacttggcttgagcagcttaaggcatcagagatctttgctttcgataccgag
accaccagcctcaactatatgcaggcaaagctggtgggggtgtctttcgcggtagagccc
taccgcgccgcctatgtgcccttggctcacgattatatgggcgcacccgagcagctgccc
ttcgatgaggttctcgccaagctgaaacctctgctggaagacgacaagcagaagaaggtt
gggcaaaacctcaagtacgacagccatatcctggccagctacggcattgcgctgcgcggt
atcgcgcgggacaccatgctggaatcctacgtattagacagcaccggcagtcgacacgat
atggacagcctggcacttaaatacctgggcgagcacacggtacatttcgaggatatcgct
ggtaaaggcgccaagcagcttaccttcaaccagattgagctggataaagccggcccctat
gccgctgaagatgcggatatcacactgcgtctgcacaatgagttgagcgcgcgcctgcaa
cgggagcgaagcttgcaggaggtgctggatgacatcgaaatgccgctgctgccggtgctc
gcgcgcatggagcgcaacggtgcctatatcgatgcgaaaatgctctctgagcagagtgcc
gagctcgagcagaagatgcgcgagctggagcaaaaggcctacgaggtggccggcgaggaa
ttcaacctgggttccaccaagcagctgggagtcattctgtttgagaaactgcagattccg
gtgatcaagaaaacccccaagggggcgccatccaccgccgaagcggtgctgcaggaactg
gcccacaaccacgagctaccggcgctgatcatgcagtaccgcggcctggccaaattgaag
aatacctacaccgataagctgccgaaaatgatcgaccccagcagcggacgggtgcatacc
tcttatcaccaggcggtggccgccactggtcgcctgtcttccagtgatcccaacctgcaa
aacattcccatccgcaccgaggagggccgccgcatccgccgcgcctttactgcggacccg
cgcattaatggcggtagtgaaattattgctgcggactattcacaaattgagctgcgcatt
atggcgcacttgtctggagataagggcttagtggatgccttcgcccatggcgccgacatc
caccgcgccactgctgccgaagtctttgaagtagcgttggatgccgtcagtgatgagcag
cgccgccgcgctaaggccatcaacttcggtctgatttacggtatgtctgcatttggcctg
gccaagcagttggatatcccgcgtgccgatgcccagacctatatcgaccgctactttgag
cgctatcctggtgtgttgcgctatatggaggatacccgcaagcaggcggcggaaaagggc
tacgtagaaaccctatttggccgccgcctgtatctgcctgagatcaactcgcgcaacggc
atgcagcgtcaagcggccgagcgcaccgccatcaatgcgcctatgcagggcaccgccgca
gatattatcaagcgcgccatgattgctgtggatgcctggcttaaagagcagaaactgtcg
acgaaactgattatgcaggtacacgatgaattggtgctcgaagtgcccaaggatgaagtc
gagacggtggccggcggcgtacaggagattatgcagggcgcggccaagctgcatgttcct
ctgattgtcgatctggggcgtggcaagaactgggatgaagcgcattga
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