Microbulbifer sp. THAF38: FIU95_04000
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Entry
FIU95_04000 CDS
T06274
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mict
Microbulbifer sp. THAF38
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mict03016
]
FIU95_04000 (rnd)
Enzymes [BR:
mict01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FIU95_04000 (rnd)
Transfer RNA biogenesis [BR:
mict03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIU95_04000 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QFT53736
UniProt:
A0A5P9ESP1
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Position
890736..891866
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AA seq
376 aa
AA seq
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MVEIDTTPRWVDSCEQLAALCAQWRQQRAVALDTEFMRSRTFYPQPALVQVGDGRHCYLI
DNLAIEDLQPLRDLLLDTAVTKIMHSCSEDLETLERLLGVIPEPIFDTQIAAAISGMGAG
LGYAATVRELLNIELPKSETRSDWLQRPLSDAQKTYAALDVAWLPVLYGALLKRLQEQGR
ESWLVEDCATLVETARSPQSPELYYQKVKGAWRLRGKQLAVLQDLCTWRECEARARNMPR
NHLLKENLCMTLAQQLPRHKGALSQVGLEGRALREHGDTLLQLIAQALERSDLPTRLPQP
LNRQQGELLKSLRKEVASIAECEKLPAEILIRKKELEALVLAPDPQLQGRLCGWRADVVG
RPLLKVLRHLRKEEMK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatagataccactccgcgctgggtggactcctgcgagcagttggcggctttg
tgcgcgcagtggcgacagcagcgtgcggtggcactggataccgagtttatgcgcagtcgc
accttttatcctcagcccgccctggtgcaggttggggatggtcggcactgctacctcatc
gataatctcgccattgaagacctgcagccgttgcgtgatctgctgctggatacagctgtt
acaaaaattatgcacagctgcagcgaggatttggaaactctggagcgtctgctgggggtg
atccccgagcccatttttgatactcagatcgccgcggcgattagtggtatgggggcgggc
ctcggttacgccgccaccgtgcgcgaactgttaaatattgaactgccgaagagcgagacc
cgctccgattggttgcagcgccctctcagtgatgcgcagaaaacttatgccgcactcgat
gtggcctggctgccagttctctatggtgccttgctgaagcgcctgcaggagcaggggcgg
gagtcttggttggtcgaggattgcgcaacgctggtagagactgcgcgaagcccacaatcc
cctgaactttattaccagaaagtgaagggggcctggcgtctgcgtggcaaacagctggct
gtgttacaggacctctgcacctggcgggagtgtgaggcgcgagcccgaaatatgccgcgc
aaccacctgctcaaggaaaatctctgtatgactctggcccaacagctgccgcggcataaa
ggtgccttgagccaagtcggcctcgaggggcgcgcactgcgagagcatggcgatacgctg
ttgcagttaattgcccaggccctggagcgcagcgacttgccgacgcgtttgccgcaaccg
ctcaaccggcaacagggggagctgttgaagtcactgcgtaaggaagttgccagtattgcg
gagtgcgaaaagctgcctgcagaaatcctgatccgcaaaaaagagttggaagccctggtt
cttgcccctgatccccaattgcaggggcgtctctgtggttggcgcgccgatgtggtgggc
cgtcccctgcttaaagttctgcgacatctgcgcaaagaggaaatgaagtga
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