Microbulbifer sp. THAF38: FIU95_06710
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Entry
FIU95_06710 CDS
T06274
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FIU95_06710 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mict03019
]
FIU95_06710 (rnc)
03009 Ribosome biogenesis [BR:
mict03009
]
FIU95_06710 (rnc)
03036 Chromosome and associated proteins [BR:
mict03036
]
FIU95_06710 (rnc)
Enzymes [BR:
mict01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FIU95_06710 (rnc)
Messenger RNA biogenesis [BR:
mict03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIU95_06710 (rnc)
Ribosome biogenesis [BR:
mict03009
]
Eukaryotic type
90S particles
RNase
FIU95_06710 (rnc)
Prokaryotic type
rRNA processing factors
FIU95_06710 (rnc)
Chromosome and associated proteins [BR:
mict03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FIU95_06710 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
QFT54249
LinkDB
All DBs
Position
1522190..1522870
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AA seq
226 aa
AA seq
DB search
MTDLLLERLCQRLGHKFEQSALLELALTHRSHGSRNNERLEFLGDSILGFTIGAALYEQF
PQGREGQLSRLRAQLVSGETLAKLARELDIGDCLRLGEGEMKSGGFRRASILADAVEALI
GAIYLDAGLEAARSRVLEWFAPRLQELSLETVKDPKTRLQEWLQARKKPLPEYSVVDVSG
AEHAQHFIVECRVSGLAQPVRGEANSRRAAEKTAAVEAYKRLTGQD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaccttttactggagcgcctctgtcagcgccttggccataagtttgaacaaagc
gcactgctggagttggcgctcacgcaccgctctcacggcagccgcaacaatgaacgtctg
gaatttctcggtgattccattctcggctttaccattggtgccgcactctacgagcaattt
ccccaggggcgcgagggccagctgagccgcttgcgcgcgcaactggtgagtggtgaaacc
ttggccaagctggcacgcgagctggatattggtgactgcttgcgcctgggtgagggcgag
atgaaaagcggcggttttcgccgcgcctcgattctggctgacgcggtagaggccctgatt
ggtgcaatctacctcgacgccggcttggaggctgcacgttccagagtactggagtggttt
gcgccacgactgcaggagttgtcactggaaacggtgaaagaccccaagacccggttgcag
gaatggttgcaggcccgcaagaaaccgctgccggagtattcggttgtggatgtttctggt
gctgagcacgcccagcactttatcgtagaatgccgcgttagcggtctggcgcagccggtg
cgcggtgaggccaatagtcgtcgcgccgcggaaaaaactgctgcggtagaggcatacaaa
cgcctcactggccaggactaa
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