Microbulbifer sp. THAF38: FIU95_06985
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Entry
FIU95_06985 CDS
T06274
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mict
Microbulbifer sp. THAF38
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mict03016
]
FIU95_06985 (rnb)
Enzymes [BR:
mict01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FIU95_06985 (rnb)
Transfer RNA biogenesis [BR:
mict03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIU95_06985 (rnb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
Rrp44_S1
Motif
Other DBs
NCBI-ProteinID:
QFT54304
UniProt:
A0A5P9EVB1
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Position
complement(1587689..1589656)
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AA seq
655 aa
AA seq
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MLNADALKQLSQLKTDIRSSKEFAEGRVRGSNGKFGFVELEDGREAFLPPNEMERVFPGD
RVRVSLSEEKKGKLSAELDTLIDSQLDYLVGQYVQRGQGHFIQPSQNGLSRWIFLPPKAR
GKAQPGEFIACKINRHPFKDGRAQAKVETVIGKPDIPGIEHAYVVAQFKLPEQFGQAAEA
QAKEISAQLTSVIAERQDLSELGFATIDAESTRDMDDALAVSIRDGGWTLHIAIADPSSV
IEAGSALDKEALARAHSQYLPGETLPMLPRNLCEDLFSLVPGELRPALVVHIDINSDGSL
GESRYEYAAISSQHKLSYIQVSQFIEGDESAVPEEQKQSLRNLAAVYEARSAYRASHSLA
MEDRPDYEIHLDDKRKIARIEKQERNVAQRMVEEAMLATNISIGGKLAELQQGCFSVHLG
FREERMGEVRSLLKELLPEHAEKDLSELPHYLALVKHLESHEDAQMQNLLAVLKRMLRPG
QLDNKAGAHLGLGLESYATVTSPIRKYNDLHNHRVLRAALQDDTAVAMSDEQIESLQESL
IRGRQANRALEQWLYTQFMQDKVGQEFTGKITLVNGAGLGVRLDEFGIDGFVRLNGDKKN
LPNFDGKHLTLTYNEQSFQLEQAIKVKVSSVDIDKRRISLELLQESSPGDTAADK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgccgacgctctgaaacaactttcacaactgaaaacagatattcgctccagt
aaggagtttgccgagggccgggttcgcggcagcaacggcaaatttggctttgtggagctg
gaggatggacgcgaggcttttttgcctcccaatgagatggaacgggttttccccggtgat
cgtgttcgcgtcagcctcagcgaggaaaagaagggcaagctcagcgctgagttggatacc
ctgatcgacagccagctggattatctggtggggcaatatgtacagcggggccaagggcat
tttatccagcccagccaaaatggcctgtcgcgctggatcttcctgccacccaaggcccgt
ggcaaggcccagcccggcgagtttatcgcctgcaaaatcaatcgacacccttttaaagat
ggccgcgcccaggcaaaagtggaaacggtcattggcaaacccgatatccccggtatcgag
catgcctatgtggtcgcgcaattcaaattgcccgagcagtttggccaggcagcagaagcc
caggcaaaggaaatcagcgcgcaactcacttcagtgatcgctgagcgccaggatctgtcc
gagttgggttttgccactatcgatgcggaaagcacccgcgatatggatgacgctctcgcc
gtcagcatccgcgacggcggctggaccctgcatatcgccatcgccgacccctccagtgtg
attgaggccggcagcgccctggacaaagaggccctcgcacgcgctcacagccaatacctg
cctggtgaaaccctgccgatgctaccgcgcaacctgtgtgaagacctattctccctggta
cctggagaactgcgcccagccctggtggttcatatcgatatcaacagcgatggcagcctg
ggcgaaagccgctacgaatatgccgcgatcagctcccagcacaaactgagctacatccag
gtgagccagtttatcgagggcgacgaatccgctgtaccggaagagcagaaacagagcctg
cgcaacctggctgccgtttatgaagcccgctctgcttatcgcgcaagtcactccctggcg
atggaagaccgccctgactacgaaattcacctcgatgacaagcgcaagatcgcacgtatc
gaaaagcaggagcgcaatgttgctcagcgcatggtggaagaagccatgctcgctaccaat
atcagcatcggcggcaaactggcagagctgcaacagggctgtttctcggtacacctgggc
ttccgtgaggagcgcatgggtgaagtccgcagcctccttaaggagttactgcccgagcat
gcagagaaagacctcagcgagctgccgcattacctggccctggttaagcaccttgaaagc
catgaagatgctcagatgcaaaacctgctggcggtactgaagcgtatgctgcgtcccggc
cagctagacaataaagctggggcacacctgggcctgggtctcgaatcctacgctaccgtg
acctctcctatccgcaagtacaatgacctgcacaaccaccgggtattgcgtgccgcccta
caggatgacactgccgtggcgatgagcgatgagcagatcgaatccctgcaggagagcctg
atccgcggccgccaggccaatcgcgctctcgagcaatggctttacacccaatttatgcag
gacaaagttggacaagagttcactggcaagatcaccctggtcaatggtgccggactcggt
gtgcgcctggatgaatttggtatcgatgggtttgttcgcctaaacggggataaaaagaac
ctaccgaattttgacggcaagcacctgaccctcacttacaacgagcaaagcttccagcta
gaacaggctatcaaggtcaaagtttcctctgtagatatcgacaagcgtcgcatttctctc
gagcttttacaggagagttcgccaggcgacacagctgcagataaataa
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