Microbulbifer sp. THAF38: FIU95_09990
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Entry
FIU95_09990 CDS
T06274
Name
(GenBank) bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FIU95_09990
09124 Replication and repair
03420 Nucleotide excision repair
FIU95_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mict03021
]
FIU95_09990
03036 Chromosome and associated proteins [BR:
mict03036
]
FIU95_09990
03400 DNA repair and recombination proteins [BR:
mict03400
]
FIU95_09990
Enzymes [BR:
mict01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FIU95_09990
Transcription machinery [BR:
mict03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FIU95_09990
Chromosome and associated proteins [BR:
mict03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FIU95_09990
DNA repair and recombination proteins [BR:
mict03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FIU95_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
TGT_C2
Motif
Other DBs
NCBI-ProteinID:
QFT54885
UniProt:
A0A5P9EWC8
LinkDB
All DBs
Position
2280282..2282804
Genome browser
AA seq
840 aa
AA seq
DB search
MGEALKKPDLIKEPTEDHTPSECAPALQISVGELVAFSCRSGDLIHTGGPGPTAQEGIRA
HQKLQKRRPKGSEAEYRLQVQLECADQAVVLEGRVDIFHPQADLHQPPQLDEIKTTYCHP
DALPEATRQLHWAQLKIYGFCYLQQLRQKGDSVAEVSLQMLWYNLKEKKSYPEQRLFTWR
ALESFAKDALTLYIQWHSDWKAHRQRLIQAAKNLSFPFPEYRPGQRQLAVTAYRCLRDAG
QLVVEAPTGIGKTISTLFPAIKALGEGKVDQLLYLTAKNSGRQVVRETIKKLHQGGLKLS
LLELRARDKTCACKLGLCNRDEEGICPRTKGFYERLPQARQQLLGQPLITPEEIAKVGDQ
WHLCPFELSLQMLPWADLVVCDFNYVFDPLVRISTLQDSRYKRALLVDEAHNLSERAREM
HSASLSRKDSRRAALACKSSYPQLYRRIQALVRALSQWSKRFQEQNLYKEMRSSQSVQAW
CSPLDSEKHRPAAVSRAIQKVLDALSELSEQAKSPPEEIGDWLKNLYRYACIEQILSDQH
QALTRVIDRDAPWEEHQLKLICLNAADFLRESFSQFHGSILFSATLRPIDFVSAQLGVEP
ETPYLVLPSPFEPSRQGVFLCSYLDTRYQARQSALPELVDLIACVYRSHPGNYLVFFPSY
QFLQIVAERFKMDHPKIQLLQQTPGASDCEREAFLASFSEGAQSLGFAIMGGVFAEGVDF
VGEKLIGTIIVGTGLPQVNEEQELLRQSAKHPQAPSAIDGFDVAYRYPGMTRVLQTAGRV
IRTESDRGVIVLADYRFGDRFYQNLYPEHWQIQTSKNGEQLSQQLGYFWNRQRLYDCIAE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgggggaggcgctcaaaaagccagatctgataaaagagcctacagaggatcataccccg
tccgaatgcgcccctgccctacagatttctgtgggtgaattagtggctttctcctgccgc
agtggggatttaattcataccggtgggccaggtccaactgcccaagagggtatccgggcc
caccaaaagctgcaaaagcggcgccctaaagggtcggaagccgaataccgtttgcaagtg
cagctggagtgcgctgaccaggctgttgtcttggaaggaagggtggatatctttcaccca
caagctgacttgcaccagcccccccagctggatgaaatcaaaaccacctattgccaccca
gatgcgctgccagaggccactcgccagctacattgggcccagcttaaaatctatggtttc
tgttacttgcaacaacttcggcaaaagggagattccgttgcagaagtctcgctgcaaatg
ctctggtataacctcaaggagaaaaagtcctacccagagcaacgccttttcacctggagg
gcgctggagagctttgccaaggatgccctcaccttatatatccaatggcatagtgactgg
aaagcacatcggcaacggttgatccaggctgcgaaaaatttatcgtttcccttccccgaa
taccgacccggtcaacgccagctggcggtaaccgcttatcgctgtctcagggatgccggc
caattggtggttgaggcacccaccggtattggcaaaacgattagcaccctattccccgct
atcaaagcccttggtgagggaaaggtggatcagctgctctacctcaccgcgaaaaactct
ggtaggcaggtggtgcgggagaccattaaaaagctacatcagggtgggctaaagctctct
ctgctggaattgcgcgcccgcgataagacctgtgcctgcaaactgggattgtgcaatcgc
gatgaagagggtatctgccctcgcaccaaaggcttctatgagcgcttaccccaagcgcgc
caacaactgttggggcaacctttaatcacccctgaagaaatcgcgaaagttggcgatcag
tggcatctctgcccatttgagctgtccctgcaaatgctgccctgggccgatctggtggtc
tgtgacttcaattatgtctttgaccccttagtgcgtatttccacactgcaagattcacgt
tacaagcgcgcactattggtagatgaagcacacaacttgagcgagcgcgcacgggaaatg
cacagcgccagtttgagccgcaaagatagtcgccgcgccgccttggcttgtaagagcagt
tacccacagctgtatcggcgtatccaagccctggtgcgcgcactttctcaatggagcaaa
aggtttcaagagcaaaacctctataaggaaatgcgctcaagccaaagtgtacaagcctgg
tgtagcccgctggatagcgaaaagcatcgtcctgcggctgtgtctcgcgctatccaaaag
gtgctagatgcactgagtgagctatcggagcaggcaaaatctccccctgaggaaatcggg
gactggttaaaaaatctttatcgatacgcctgcatagaacaaatcctttcagatcaacac
caagccctcactcgggtaatcgatcgggatgccccctgggaggagcatcagctaaagctg
atatgcctgaatgccgcagacttcctgcgggagtcattttcccagtttcatgggagtatt
ctgttctcagccacactgcgccccatagatttcgtctctgcacaacttggggttgagccc
gagaccccatacttggtacttccttcgcctttcgaaccctcccgccagggcgtatttctt
tgttcttacttagatacccgctaccaggcacgtcagagtgcgctaccagaattagtggac
ctgattgcctgcgtttaccgtagccatcccggcaactatttggtgtttttcccttcttat
cagttcctgcaaatagttgcagagcgattcaaaatggatcacccgaagatacaactgcta
caacaaacacccggagccagtgattgcgaaagagaagcctttttagcctcgtttagtgaa
ggtgcacaaagcctgggttttgccattatggggggagtctttgctgagggcgttgatttt
gtcggggagaaattgattggcactattatcgtaggtaccggccttccccaggtaaatgaa
gagcaagagctactacgacaatcagcaaagcacccgcaggccccctcggcgattgatggg
tttgatgttgcctaccgctatcccggcatgacccgggtattgcagacagcgggaagagtg
attcgcactgaatctgatcggggcgtgattgttttagctgactatcgttttggggatagg
ttttatcaaaacctatatcccgaacattggcaaatccaaacaagtaagaacggcgaacaa
ctttcacagcagttgggttatttttggaaccggcaacgcttgtacgattgcatcgcagaa
taa
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