Microbulbifer sp. THAF38: FIU95_12015
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Entry
FIU95_12015 CDS
T06274
Symbol
lcfB3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict00061
Fatty acid biosynthesis
mict00071
Fatty acid degradation
mict01100
Metabolic pathways
mict01212
Fatty acid metabolism
mict02024
Quorum sensing
mict04146
Peroxisome
Module
mict_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FIU95_12015 (lcfB3)
00071 Fatty acid degradation
FIU95_12015 (lcfB3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU95_12015 (lcfB3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU95_12015 (lcfB3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mict01004
]
FIU95_12015 (lcfB3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mict04147
]
FIU95_12015 (lcfB3)
Enzymes [BR:
mict01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FIU95_12015 (lcfB3)
Lipid biosynthesis proteins [BR:
mict01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FIU95_12015 (lcfB3)
Exosome [BR:
mict04147
]
Exosomal proteins
Exosomal proteins of breast milk
FIU95_12015 (lcfB3)
Exosomal proteins of breast cancer cells
FIU95_12015 (lcfB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QFT55283
LinkDB
All DBs
Position
complement(2737237..2738706)
Genome browser
AA seq
489 aa
AA seq
DB search
MFSLADLFDRVVTGFWCGSLENLTGEKLTAQCCESALSLLQQADIQLAHGDRVVIRAQND
IFTVATMLAAWHLGLVVVPVKGDATQSAINSIASDCNAKGIVDGEEIVPLETYRPQQQLF
ELCTPARVTGVDLALIIYTSGSTGKPKGIMLTHQNVLTSLESLSQYLRLSGEDRILCLSP
LSFDYGLYQVLFALYKGCSTILYDKTFNPLQALKVISELKISVLPIVPAMGAALAKLLAL
VKPDLSALRAITNTGGHLPEYVIRTWKEYRPSLDVFSMYGLTECKRALYLEPELWEQKMG
SVGKPIPGLDARIFLLDTQANTYREAQANKVGELFVRGSGVMQAYYDPSAQGGAQIVSGL
YRDDNWLATGDLFSRDDEGFYYFKGRSKDLIKQAGFCLFPKDLENVIDACPLVHLSVVIG
STDKFQNEIAVCVLELQENTPENQQQFKVWLKENLDADYTPREVRFVESIELTANGKIDK
KKLEQELQS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcttgccgacctgttcgacagggttgttactggtttctggtgtggaagcctt
gaaaatctgactggggaaaaattaacggctcaatgttgtgaaagtgcattgtctcttttg
cagcaggccgatattcagttggcccatggggacagagttgttattagggcacagaacgat
atttttactgtggcgacaatgttggccgcctggcatctaggcttggtggtagttccggtc
aagggcgatgcaacacaatccgcgataaattctattgcctctgactgcaatgccaaggga
atagtggatggtgaagaaatcgttccattggaaacttaccggccgcagcaacagttattt
gagctttgtactcccgccagggttacaggtgtcgacctggccctgattatctacacctcg
ggtagtactggtaagccaaagggcatcatgctcactcaccagaatgtgcttacctctttg
gaatctctctctcagtaccttcgcctgtctggcgaagatcgtattttatgtctatcacct
ctgtcgtttgattacggcctgtatcaagtgttgtttgccctctataagggttgctcaaca
attctttacgataaaacattcaatcctctgcaggctttgaaagtaatatctgaactgaaa
atttcagtgttacccattgttccggcaatgggcgccgcactggcgaaacttttggcactg
gtaaaacccgatctttctgcactacgcgctattaccaataccggtggtcacttaccggag
tatgtaattcgtacttggaaagagtatcgtccttcgcttgatgttttctcaatgtatggt
ttgaccgagtgtaaaagagccctgtacctggagccggagctatgggagcaaaaaatgggt
tctgtagggaagcctattcctgggttggacgctcgcatctttctgctcgacacccaggcg
aatacctacagggaagctcaagccaataaagttggtgagctcttcgtgcgtggctcaggg
gttatgcaagcgtactatgatcccagtgctcaggggggagcgcaaattgttagcggtctt
taccgggatgataactggctcgctaccggtgatttgttcagtcgggatgatgagggcttt
tattactttaagggtcgctccaaagacctgatcaaacaagcaggtttttgtctgttcccc
aaagatctggagaatgtaatagacgcttgtccattggtgcacctcagtgtggttattggt
tctacagacaaatttcaaaatgaaatagcagtctgtgtgctcgagctacaagaaaacaca
cctgagaatcagcagcagtttaaagtgtggttaaaagagaatctggatgctgattacaca
cccagggaagtaagatttgtcgagtcaattgaattgacggcaaatggcaaaattgacaaa
aagaaactggagcaagagcttcaatcctga
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