Microbulbifer sp. THAF38: FIU95_14870
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Entry
FIU95_14870 CDS
T06274
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mict
Microbulbifer sp. THAF38
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mict03016
]
FIU95_14870 (truD)
Enzymes [BR:
mict01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FIU95_14870 (truD)
Transfer RNA biogenesis [BR:
mict03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIU95_14870 (truD)
Prokaryotic type
FIU95_14870 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFT55831
UniProt:
A0A5P9EYF1
LinkDB
All DBs
Position
complement(3289853..3290815)
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AA seq
320 aa
AA seq
DB search
MSEVWNLNWPRALGGAAISADFRTVAEDFVVDELAFPEPSEDGEHVYLHIKKRGANTAWV
AKQLAKLAGVRPLDVSYFGLKDRHAVTTQWFSVWLGQKPEADWSQINSDEVSLLQFLRGA
RKLRRGEHAGNRFKIRLRNVCGDRAAAEKVLEQIGGGVPNYFGEQRFGINGGNLDLVRNL
AEEEGRCRKSEKAFAMSAARSWLFNQILAERVTIDNWQQCLEGEPQSESTGPLWGRGRNL
ASGPQGEIEQRVLEKWQAWCNWLEHCGLKQERRPLILRPEAFRFEWQSDDLRLEFALPPG
AFATALLREVAQLVNVNSDT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtctggaatctgaattggccccgcgctttgggtggggcggcaatctctgct
gatttccgtacggttgcggaagattttgttgtcgatgagctggcatttcccgagccatca
gaggatggcgagcatgtctacctgcatatcaagaagcggggtgccaacactgcctgggta
gcaaagcagctggctaaactcgccggagtacgtcccctggatgtgagctactttgggcta
aaggatcggcatgcagtaaccacgcagtggtttagtgtttggctcggacagaagccagag
gcagactggtcacagatcaatagtgatgaggtttcacttctgcagtttctcaggggtgcc
cgtaagctgcgtcgcggtgagcatgctggtaatcggtttaaaattcgccttcgcaacgtc
tgcggtgatcgggcggctgcggaaaaggtgcttgagcaaattggcggtggagtgccaaat
tattttggtgagcagcgcttcggtattaatggcggcaacctggatttggtacgtaatctg
gcagaagaagaggggcgttgtcgcaagagcgaaaaggcattcgcgatgtcggctgcgcgc
agctggctgtttaatcagatattggctgagagagttactatcgataactggcagcaatgt
cttgaaggtgagccacaaagtgagtcaactggccctctgtgggggcgcggcaggaacctc
gcctcgggtcctcaaggcgaaatagagcagcgagtattagagaaatggcaggcttggtgt
aactggctggagcattgcgggctcaagcaggagcgcagaccgctgattctccgtccagag
gcctttcgttttgagtggcagtccgacgacctccgtttggagtttgctttaccgcccggc
gcatttgcaacagccctgctcagggaggtggcacagctggtcaatgtgaactcggacaca
taa
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