Microbulbifer sp. THAF38: FIU95_14940
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Entry
FIU95_14940 CDS
T06274
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03030
DNA replication
mict03430
Mismatch repair
mict03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU95_14940 (dnaE)
03430 Mismatch repair
FIU95_14940 (dnaE)
03440 Homologous recombination
FIU95_14940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mict03032
]
FIU95_14940 (dnaE)
03400 DNA repair and recombination proteins [BR:
mict03400
]
FIU95_14940 (dnaE)
Enzymes [BR:
mict01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU95_14940 (dnaE)
DNA replication proteins [BR:
mict03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU95_14940 (dnaE)
DNA repair and recombination proteins [BR:
mict03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU95_14940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QFT55845
UniProt:
A0A5P9EZI3
LinkDB
All DBs
Position
complement(3307596..3311114)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTQPFVHLRIHSEFSLIDGLVRIKPAIARAQELEMPALAITDQCNLYGQIKFYRACLGAG
IKPITAADFWLSEGGEGKPTLITLYAMNADGYRNVTELISRAWMEGQYHGNAYIKREWVK
EYSEGVLMLSGAKYGDVGRALVAGRRAQAEELAREWAELFPGRYYLELQRTGRAGDEDYL
HSAVDLAQTLNLPVVATNDVRFMEESEFEAHEVRVCIHEGRALDDPRRERRYSAEQYFRT
PEEMWELFGDIPEALENTVEIAKRCSAPIQLGKYFLPEYPIPEGMTEDQFFEKVSYEGME
RRLATILDKSAADYAERRQVYEDRLRFELDIIIQMGFPGYFLIVMDFIQWAKDHDIPVGP
GRGSGAGSLVAYSLDITDLDPLQYDLLFERFLNPERVSMPDFDIDFCMEKRDRVIGYVAD
NYGRQAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPDVGMTLQKAFDQEEI
LREFLDHDDEGQEIWEMALQLEGVSRNVGKHAGGVVIAPTKLTDFAPLYCDETGAGLVTQ
FDKNDVEDAGLVKFDFLGLRTLTIIDWAKRMVDETRAREGEEPLDIAALPLDDEETFKML
KRAETTAVFQLESRGMKDLIKRLQPDNLEDMIALVALFRPGPLQSGMVDDFINRKHGRAQ
VAYPDAKYQHEKLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEM
AKQRATFENGAKEQGIDPELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPA
QFMAATMSSDMDKTDKVVTFIEECRAMELVLVPPDVNLGSFQFSVDIDNRIIYGLGAIKG
LGEGPIENIIAARKEGGPFTDLFDFCSRVDPRKVNKRALEALVRSGAFDSIGPDTGGSDG
LDYSRAVLFNALDEAVKAAEQQKANANAGMMDLFGEVVPQSSDGDVYEDFRRTRCWSIRE
RLEGEKNTLGLYLTGHPIDEYADELQHLVKARIADLKPGREAQKVAGLVVAMRVMKTKRG
DSMAIVTLDDRSGRIEAAMFSEAFGEHRDKLAKDALLVLEGPVANDDYSGGLKMTVNGVS
TLDELRQSRVTGVRLQVDTGVAAPGLAKRLASCLQPYTGGQCGVSLEVLRHDARGLYRLP
PQWNVEPNDQMVQSLRELLGRERVALQYAERR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccctttgtccacctaagaattcactcggaattttccttgatcgatggcctg
gtacgtatcaagcccgccattgcccgtgcccaggagctggaaatgccggccctggcgatc
actgaccagtgcaacctctatggccagatcaagttctaccgagcctgtttgggtgccggt
atcaagccgattaccgccgcggatttttggcttagcgagggcggcgagggcaagcccacg
ctaatcacgctttatgcgatgaatgccgatggctatcgaaatgtcaccgagctgatctcc
cgcgcttggatggagggccagtaccacggtaacgcctatatcaagcgcgaatgggtgaaa
gagtacagcgagggggtactgatgctgtccggtgccaagtacggcgatgtaggccgtgcc
ttggttgcggggcgtcgcgcccaggcagaggaactagcaagggagtgggcagaactgttc
cccggtcgctattacctggagctgcagcgcaccggtcgcgctggcgatgaggactatttg
cattcggcggtggatctggcacagacactgaatttgccagtggtggccactaacgatgtg
cgctttatggaggagagcgagttcgaggcccacgaggtacgtgtctgcattcacgaaggc
cgtgcacttgatgacccccgccgcgagcgccgctattccgccgaacagtatttccgtaca
ccggaagagatgtgggagctatttggcgatatccccgaagctctggaaaataccgtggag
atcgccaaacgctgctccgcgccaatccagttgggtaaatactttctgccggagtacccc
attcccgaaggcatgaccgaagaccagttcttcgagaaggtctcctacgagggcatggag
cggcgcctagcgaccatcctcgacaaatccgctgcggactatgccgagcgccgccaggtc
tacgaagaccgcctgcgctttgagctggatatcatcatccagatgggattccccggctac
ttcctgatcgtaatggactttatccagtgggccaaagaccacgatatcccagtgggcccg
gggcggggttccggtgccggctcgctagtggcttactcgctggatattaccgatctggac
ccgctgcaatacgatctgctgttcgagcgattcctcaacccggagcgggtatcgatgccc
gacttcgatatcgacttctgtatggagaagcgcgaccgggtaattggctacgtagcggat
aactatggccgccaggcggtgagccagattattactttcggcaccatggccgcgaaagcg
gtggtgcgcgacgtggcgcgggtgcagggcaagtcctatggtcttgccgacaagctatcg
aagatgattccccccgatgtgggcatgaccctgcaaaaggccttcgaccaggaagagatc
ctgcgggaattcctcgaccacgacgatgagggccaggaaatctgggagatggccctgcaa
ctcgaaggggtttcccgtaacgtgggcaagcacgccggtggtgtggttatcgcccccacc
aagctcaccgattttgcgccgctttactgtgacgagaccggcgcgggtctggtcacccag
ttcgataaaaacgacgtggaagatgcgggcctggtgaagttcgacttcctcggcctgcgg
acgctgaccatcatcgactgggccaagcgtatggtggacgagacccgtgcgcgcgagggt
gaggagcccctggatattgccgcgctgccgctggacgatgaagaaaccttcaaaatgctc
aaaagagcggagaccacggcggtattccagctggaatcccggggtatgaaggacctgatc
aagcgcctgcagccggacaacctggaagatatgatcgccctggtggccctgttccgtccg
ggcccgctgcagtcgggcatggtggatgactttattaaccggaagcacggccgcgcccag
gtggcctatccggatgcgaaataccagcacgagaagctgaaaccgatcctggagcccact
tacggggtgatcgtttaccaggaacaggtgatgcagatcgcccaggagttggcgggatat
accctcggtggcgccgacctgttgcgccgggcaatgggtaaaaagaaaccggaggaaatg
gccaaacagagggccacttttgaaaacggggcaaaagagcaaggcatcgaccccgaactt
gcgattaagatcttcgacctggtagagaagttcgcgggttatggctttaacaagtctcac
tcggcagcttacgcactggtgtcttatcagacggcctggctgaaagcccattacccggcc
cagtttatggcggcaaccatgtcttcggatatggataagaccgataaggtggtgaccttt
atcgaagaatgccgcgccatggagttggtgttggtgccgccggatgtcaatctgggcagc
ttccagttctcggtggatatcgacaaccgcattatttacggtctcggtgccatcaagggc
ctgggtgaggggccgattgaaaatattattgcggcgcgaaaggagggcggtccctttacc
gacctgtttgacttctgttcccgtgttgatccgcgcaaggtgaacaagcgcgcactggag
gcgctggtgcgctccggtgctttcgacagtatcgggccggatactggcggcagcgatgga
ctggattattcccgcgcagtgctgtttaacgcgctggatgaagcggtaaaggcggcggaa
caacaaaaggccaatgccaatgccggcatgatggacctgttcggcgaggtggtgccccaa
tcttccgatggtgatgtgtacgaggatttccgccgtacccgctgctggagtattcgcgag
cgcttggagggggagaaaaacaccctgggtctgtacctcaccggacaccccatcgacgaa
tatgccgatgagttacagcacctagtcaaggcgcgaatcgccgatttaaaacccggccgt
gaagcacaaaaagtggcaggtctggtggtggccatgcgggtgatgaagaccaagcgtggt
gattccatggctattgttaccctggatgatcgcagtggccgcattgaggcggccatgttc
agcgaggcgtttggcgagcaccgtgacaagctggccaaggatgcgctactggtactcgaa
ggccctgtagccaatgacgattacagtggcggtctgaaaatgaccgtaaatggggtctcc
actctggatgagctgcgccagagccgggtgaccggtgtgcgtttgcaagtcgataccggt
gttgcggcaccgggactggccaagcgtctggcctcgtgtttgcagccttataccggcggc
cagtgcggggtcagcctggaagtgttgcgccacgatgcgcgaggtctctaccgcctgcct
ccacagtggaatgtggagccgaatgaccagatggttcagtccctgcgggagctgctgggc
cgggagcgggtggcgcttcaatacgctgaacggcgttaa
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