Microbulbifer sp. THAF38: FIU95_16780
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Entry
FIU95_16780 CDS
T06274
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU95_16780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mict03019
]
FIU95_16780 (pnp)
03016 Transfer RNA biogenesis [BR:
mict03016
]
FIU95_16780 (pnp)
Enzymes [BR:
mict01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FIU95_16780 (pnp)
Messenger RNA biogenesis [BR:
mict03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIU95_16780 (pnp)
Transfer RNA biogenesis [BR:
mict03016
]
Prokaryotic type
tRNA degradation factors
FIU95_16780 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
YrbL-PhoP_reg
Motif
Other DBs
NCBI-ProteinID:
QFT56207
LinkDB
All DBs
Position
complement(3715464..3717587)
Genome browser
AA seq
707 aa
AA seq
DB search
MNPVSKTFQYGQHQVTIETGRIARQATGSALVTMGETVVLCTVVGAKEAKPDQGFFPLSV
HYQEKAYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVMCTVLSAE
KDMDPDIAAMIGTSAALSVSGIPFAGPIGAARVGYTQQDGYLLNPGYQALKTSELDMVVA
GTKDAVLMVESEAQELPEDIMLGAVLYAHQEMQAIIKVCEELKAEAGKPQWDWQAPAENT
ELKTALEGQFGEKVAEAYRITNKQERSTRLAELRSEAAEALSTEEISADLVKSYFGKLEK
KLVRGAVVRGEPRIDGRDSKTVRSIAVEVGALPKSHGSALFTRGETQALVVATLGSTGDA
QIIDALEGERKDYFMLHYNFPPYSVGEAGRVGATGRREIGHGRLARRGIAAVLPSSDSFP
YTVRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEDEGYAVLTDIL
GDEDHLGDMDFKVAGTASGVTALQMDIKIEGITEEIMETALEQALHARLHILAEMNKVID
SSRTTVNENAPRYATLKIHPDKIRDVIGKGGATIRSITEETGASIDIEDDGTIKVFGEDG
ESLEAAVTRIEEITAEAEIGAIYEGTVVRIVDFGAFVNFLPGKDGLVHISQIAEERVNAV
TDYLSEGEKVKVKVLDVDQRGRIKLSIKEVKAEQAASEEAKQGSEEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaagcaaaaccttccaatacggacaacaccaagtcaccatcgaaaccggc
cgcatcgcgcgtcaggcgacgggctccgctctggttaccatgggtgagactgttgttctg
tgtaccgttgtcggtgccaaggaagccaagcccgatcaaggcttcttcccgctgtccgtg
cactatcaggaaaaagcctacgcggctggcaaaattcccggtggcttcttcaagcgtgaa
ggccgcccgtctgaaaaagaaactctgacttcccgtctgatcgatcgcccgatccgccca
ctgttccccaacggctttatgaacgaagtacaggtaatgtgtactgtactttctgccgag
aaggatatggacccggatatcgctgccatgatcggtacctccgcagcgctgtctgtctcc
ggcatccccttcgcaggccccatcggcgctgcgcgtgtgggttacacccagcaagatggc
tatctgctgaacccgggttaccaggctctgaagacctccgaactggacatggtggtagcc
ggcactaaagacgccgtactgatggtggaatccgaagcgcaagagctgccggaagacatc
atgctgggcgccgtactatacgcgcaccaggaaatgcaagccatcatcaaggtgtgtgaa
gagctgaaagccgaagctggcaagccccagtgggattggcaggcaccggcggaaaacacc
gagctgaaaacggctctggaaggccaattcggcgagaaagttgccgaagcctaccgtatc
accaacaagcaggagcgcagcacccgcctggcggaattgcgcagcgaagcggccgaagca
ctctccactgaagaaattagcgccgacctggtaaaaagctacttcggcaagctggagaaa
aaactggtgcgcggcgctgtagtgcgtggcgagccccgtatcgacggtcgcgacagcaaa
actgtacgttcgatcgctgtggaagttggcgctctgcccaagtcccacggctctgcgctg
ttcacccgcggtgagacccaggccctggtagtggctaccctcggttccactggcgatgca
cagatcatcgacgccctggaaggtgagcgcaaagactactttatgctgcactacaacttc
cctccctactctgtaggtgaggcgggtcgtgtaggtgctaccggtcgccgcgaaattggt
cacggccgcctggcgcgccgcggcatcgctgcagtgctgccgagctcggacagcttcccc
tacaccgtgcgtgtggtttccgagatcactgagtccaacggttccagctccatggcttcc
gtatgtggttccagcctggcgctgatggatgcgggtgttccgctgaaggcaccggtagcc
ggtatcgctatgggtctggtgaaggaagacgaaggctatgcggttctgaccgatatcctc
ggtgacgaagaccacctcggcgatatggactttaaagtagccggtactgcctctggtgta
accgcgctgcagatggacatcaagatcgagggtattaccgaagagatcatggaaaccgct
ctggagcaggccctgcacgcgcgtctgcacatcctggcggaaatgaacaaggtgatcgat
tcctcgcgcacaactgtgaacgagaacgcaccgcgctacgcgaccctgaagatccatccg
gacaagatccgcgacgtgatcggtaagggcggtgcgactattcgctccatcactgaagag
accggcgcctccatcgatatcgaagatgacggtactatcaaagtctttggggaagatggc
gagagcctcgaagcggcggttacccgtatcgaggaaatcaccgcagaagccgagatcggc
gctatctacgagggcactgtggtgcgcatcgtggacttcggtgcatttgtaaacttcctg
ccgggcaaagatggtctggtgcatatttcccagattgcggaagagcgcgtaaatgccgtg
accgattacctgagcgaaggtgagaaggttaaggttaaggtactcgacgttgaccagcgc
ggacgcatcaagctgtccattaaggaagtaaaggctgagcaagccgcttccgaagaggcg
aaacaaggttccgaagaggcctaa
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