Microbulbifer sp. THAF38: FIU95_20860
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Entry
FIU95_20860 CDS
T06274
Symbol
uvrD2
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mict
Microbulbifer sp. THAF38
Pathway
mict03420
Nucleotide excision repair
mict03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIU95_20860 (uvrD2)
03430 Mismatch repair
FIU95_20860 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mict03400
]
FIU95_20860 (uvrD2)
Enzymes [BR:
mict01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU95_20860 (uvrD2)
DNA repair and recombination proteins [BR:
mict03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU95_20860 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
FIU95_20860 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QFT57003
LinkDB
All DBs
Position
complement(4626646..4628850)
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AA seq
734 aa
AA seq
DB search
MDVSQILDPLNDAQREAVAAAPGNQLVLAGAGSGKTRVLVHRIAWLMQVEGASPYSIMAV
TFTNKAAREMRARIEELLGVNTFGMWVGTFHGLAHRLLKAHWQEAKLPQNFQILDSDDQL
RLIKRVQTDLGLDDKKWPPRETQWWIGAQKDEGLRPQYINAGADPWLQTMVRIYFAYEEA
CQRGGLVDFGELLLRAHELWLNNDAILAHYRRRFPFILVDEFQDTNTIQYAWLRLLAGEQ
CHITAVGDDDQSIYGWRGAKIENIQHFSTDLREVQTVRLEQNYRSTSTILNAANAVIANN
SGRLGKELWTKGDEGEPIAVYAAYNEQDESRFIVERINDWVRDGNRRDSIAILYRSNAQS
RVLEEGLLREQVPYRIYGGQRFYDRLEIKNALSYLRLISNRNDDTAFERVVNTPTRGIGA
RTVEMVRSFAREQGCSLWQAAKLMLQQRVLAARAGNALQSFLDLINQLAANAEDKELDAI
AEDVIETSGLLEFHGKEKGEKGQTRVENLQELVTACRSFTGVDLPEGEEDEEEIPLLNQF
LDSAALDAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMAGVEENLFPHKMSAQEPGRMEE
ERRLCYVGITRAMRKLYITYAENRRLFGSETYNSPSRFIGEIPANLVHEVRLKTEISRPL
YQADYGKVGQFSDPAPDFDDLPPLALGGRVEHARFGEGTVVQFEGNGPRARVQVNFDDAG
SKWLVVAMAKLQPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctcagattttagacccccttaacgacgcccagcgcgaagcggtagctgcc
gcgccaggcaatcaattggttctggccggtgccggctcgggcaagacccgcgtgctggtg
caccgtattgcctggctgatgcaggtggagggcgcctcgccctactccattatggcggtg
accttcaccaacaaggccgcccgcgagatgcgcgccagaattgaggagctgctgggggtg
aataccttcggtatgtgggtgggcaccttccacggtttggcccatcggctactcaaggcc
cactggcaagaggccaagttgccgcagaatttccagattctggattccgacgaccagctg
cgtttgatcaagcgggtgcagacagatctgggcctggacgataagaagtggccaccgcgg
gagacccagtggtggattggtgcgcagaaagacgaaggcctgcgcccgcaatatattaat
gccggcgccgatccctggctgcagaccatggtgcgcatctacttcgcctatgaagaggcc
tgccagcgtggtggattggtggacttcggtgagctgctgctgcgtgcccacgagctctgg
ctgaataacgacgctattctcgcccactaccgtcggcgtttcccctttatcctggtggat
gagttccaggataccaacaccatccaatacgcctggctgcgcctgctcgctggggagcag
tgccacatcaccgccgtgggggatgatgaccagtccatttacggctggcgcggcgccaag
atcgagaatatccagcacttttccacagacttgcgcgaagtgcagacggtgcgactggag
caaaattatcgttccacctccaccattttgaacgcggccaacgcggtgatcgccaataac
agcggtcgcctgggtaaggagctgtggaccaagggcgatgagggcgagcccatcgccgtc
tacgccgcctataacgagcaggatgaatcgcgctttattgtcgagcgtattaatgactgg
gtgcgcgatggcaaccgccgtgacagtatcgctattctctaccgctccaatgcccaatct
cgggtacttgaagaaggccttctgcgcgagcaagtgccttaccgtatttacggcggccag
cgtttctacgaccgcctggaaatcaaaaatgccctttcctatctgcgcctgatcagcaac
cgcaatgatgacaccgcctttgagcgggtggtgaatacccccacgcgcggtatcggtgcg
cgcacggtggagatggtgcgctcttttgctcgcgagcagggctgttctctgtggcaggcg
gccaagctgatgttgcaacagcgggttctcgctgcgcgcgccggtaatgccttgcagagc
ttcctggatctgatcaaccagctggctgcaaatgccgaagataaagagctggacgccatt
gccgaggatgtaatcgaaaccagcggcctgctggaattccacggtaaagaaaaaggtgag
aagggccagacccgggtggaaaacttgcaggagctagtgactgcttgtcgctcttttacc
ggtgtggaccttcccgagggtgaggaagatgaggaggaaatacctcttcttaaccagttc
ctcgacagtgctgccctcgatgccggtgaaggccaagcggatgagtttgaagatgcggtc
cagctgatgactctacactccgccaagggcctggagtttcccctggtatttatggcgggt
gtggaggaaaacttgttcccgcacaaaatgtccgcgcaagaacccggccgcatggaggaa
gagcgacgcctctgctacgtgggtattacccgcgccatgcgcaagctgtatatcacctac
gcggaaaaccgtcgcctgtttggcagcgagacctataacagcccgtctcgttttatcggt
gagattcctgcgaacctggtacacgaagtgcgcctgaaaactgaaatttcccgaccactc
tatcaggcggactacggtaaggtgggtcagttctctgatccggccccggacttcgatgac
ctgccaccactggccctgggcggtcgagtggagcatgcaaggtttggcgaaggcaccgta
gtacagttcgaaggcaatggtccacgtgcgcgggtgcaggtcaatttcgatgatgccggt
agtaaatggctggtggtggctatggctaagttgcagcccctatag
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