Micrococcus sp. HOU01: SOY78_04020
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Entry
SOY78_04020 CDS
T10249
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
micu Micrococcus sp. HOU01
Pathway
micu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOY78_04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micu03021
]
SOY78_04020
03400 DNA repair and recombination proteins [BR:
micu03400
]
SOY78_04020
Enzymes [BR:
micu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOY78_04020
Transcription machinery [BR:
micu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SOY78_04020
DNA repair and recombination proteins [BR:
micu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SOY78_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WRQ44380
LinkDB
All DBs
Position
849891..850889
Genome browser
AA seq
332 aa
AA seq
DB search
MLIAQRPTLTEEVVSDRRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFSTVNGVKEDVTEIILNIKKLSVSSENDEPVVAYLRKQGAGVVTAADITAPAGVEIHN
PDLHIATLNAKGKFDMELTIERGRGYVTAAQNKSADAEIGRIPVDSIYSPVLKVTFKVEA
TRVEQRTDFDRLLLDVETKENMLPRDAVASAGSTLVELFGLARSLNVEAEGIDLGDEPEV
VEGSADLAQPIEELELTVRSYNCLKREGIHTVGELVGRSEADLMDIRNFGAKSIDEVKEK
LQELGLSLKDSPAGYDPQAHARQMDDDPFSDF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgctgaccgaagaggtcgtctccgaccgtcgttcccgg
ttcgtcatcgagcccctggagcccggcttcggctacaccctcggcaactccctgcgccgc
actctgctctcgtcgatccccggtgctgccgtgaccagcatccgcgtggacggcgtgctg
cacgagttcagcaccgtcaacggagtcaaggaggatgtcaccgagatcatcctcaacatc
aagaagctctccgtctcctcggagaacgacgagcccgtggtggcctacctgcgcaagcag
ggggccggcgtcgtcaccgccgcggacatcaccgcgccggccggcgtcgagatccacaac
ccggacctgcacatcgcgaccctgaacgcgaagggcaagttcgacatggagctgaccatc
gagcgcggtcgcggctacgtgaccgccgcccagaacaagtccgcggatgcggagatcggc
cgcatcccggtcgactccatctactccccggtcctcaaggtgaccttcaaggtcgaggcc
acccgtgtggagcagcgcaccgacttcgaccgtctgctcctggacgtggagaccaaggag
aacatgctgccgcgtgacgcggtggcctctgccggctccaccctggtcgagctgttcggc
ctggcccgctcgctcaacgtcgaggccgagggcatcgacctgggcgacgagcccgaggtc
gtcgagggctccgccgacctggcccagccgatcgaggagctcgagctcaccgtgcgctcg
tacaactgcctcaagcgcgagggcatccacaccgtgggcgagctcgtgggccgttccgag
gccgacctgatggacatccgcaacttcggcgcgaagtccatcgacgaggtcaaggagaag
ctccaggagctgggcctgtccctcaaggactcgccggccggctatgacccgcaggcgcac
gcgcgccagatggacgacgacccgttctcggacttctga
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