Micrococcus sp. HOU01: SOY78_04980
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Entry
SOY78_04980 CDS
T10249
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micu Micrococcus sp. HOU01
Pathway
micu03420
Nucleotide excision repair
micu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOY78_04980
03430 Mismatch repair
SOY78_04980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micu03400
]
SOY78_04980
Enzymes [BR:
micu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOY78_04980
DNA repair and recombination proteins [BR:
micu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOY78_04980
MMR (mismatch excision repair)
Other MMR factors
SOY78_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
PG_binding_2
PHDvar_NSD
Motif
Other DBs
NCBI-ProteinID:
WRQ44559
LinkDB
All DBs
Position
1057751..1059880
Genome browser
AA seq
709 aa
AA seq
DB search
MSTPDEILRGLDPEQRRAATALHGPVCILASAGTGKTRAITHRIAYGVASGVFDPHRTLA
LTFTARAAAEMRTRLRDLGVAGVQARTFHSAALRQLQYFWPQAVGGPMPSLIENKVRLLT
EVAQRMRMTVDRAGLRDLAGEIEWAKVSLHAPEGYAEAAKEREMPAGWTATTVARLYTGY
EEAKTARNMIDFEDVLLILVGILSTEPQIAATIRDQYRVFVVDEYQDVSPLQHRLLDLWL
GDRGDLCVVGDASQTIYSFTGATSRFLTDFRERYPAATVVRLVRDYRSSPQIVEAANRLL
ADRTKAGERDRTMPRWPDPLELVSQRPAGPDLVFAECTDDEAEAGWVADRIAALIDDGVP
ASEIAVLFRTNGQSQAFETALSSAGIGYQLRGGERFFSRREVRDGILQLRAAARAAQDLT
GDDVTDRVRDVLSSLGYSAEPPAASGAARERWESLHALVNLADQLATTRGTEFTLTELVA
ELDERAQHQHAPTVQGITLASLHSAKGLEWDAVFLVGLSEGLMPISFAETQAEVDEERRL
LYVGITRARQHLSLTWTLSRGTGGRSTRRPSRFLWALDPTLGGTREHAPARGSAAGPTAP
RRRGAKVAVCRTCGKPLETGAERKVGRCLDCPATYDEAVLEELRDWRTRTAAEMRMPAFV
VFTDATLMAIAEAMPRTPAELLKVPGLGKAKLEKHGPELLELLHGTPTA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccgacgagatcctccgcggcctcgacccggagcagcgccgggccgccacg
gccctgcacgggcccgtctgcatcctggccagcgccggcaccggcaagacccgcgccatc
acgcaccgcatcgcctacggcgtggcctccggcgtcttcgacccgcaccgcaccctcgcc
ctgaccttcacggcgcgcgccgccgcggagatgcgcacccgcctgcgcgacctcggcgtg
gccggcgtccaggcccgcacgttccactcggcggccctgcgccagctgcagtacttctgg
ccccaggccgtgggcgggcccatgccctcgctgatcgagaacaaggtgcgcctgctcacg
gaggtcgcccagcgcatgcgcatgaccgtggaccgggccggcctgcgcgacctcgccggc
gagatcgaatgggccaaggtctccctgcacgcccccgagggctacgccgaggccgcgaag
gagcgggagatgcccgccggctggaccgccaccaccgtcgcccgtctctacaccggctac
gaggaggccaagacagcccggaacatgatcgacttcgaggacgtgctgctgatcctcgtg
gggatcctgtccaccgagccgcagatcgcggccacgatccgggaccagtaccgcgtgttc
gtggtggacgagtaccaggacgtctcgccgctgcagcaccgcctgctcgacctctggctc
ggcgaccgcggcgacctgtgcgtcgtcggcgacgcctcccagacgatctactcgttcacg
ggcgcgacctcccgcttcctcaccgacttccgtgagcggtaccccgcggccacggtggtc
cggctcgtgcgcgactaccggtccagcccgcagatcgtggaggcggccaaccgcctgctg
gcggaccgcaccaaggcgggggagcgggaccgcacgatgccgcgctggcccgaccccctc
gagctcgtctcccagcggccggccggccccgacctcgtgttcgcggagtgcaccgacgac
gaggccgaggccggctgggtcgccgaccggatcgcggcgctgatcgacgacggcgtgccg
gcctccgagatcgccgtcctgttccgcaccaacggccagtcccaggccttcgagacggcg
ctgtcctcggcgggcatcggctaccagctgcgcggcggcgagcggttcttctcccggcgc
gaggtgcgcgacggcatcctgcagctgcgggccgccgcccgcgccgcccaggacctgacg
ggcgacgacgtcacggaccgggtgcgggacgtgctctcctcgctcggctactccgccgaa
ccgccggcggcctccggcgcggcccgtgaacggtgggagtccctgcacgccctcgtcaac
ctcgccgaccagctcgccacgacgcgcgggaccgagttcacgctgaccgagctcgtggcc
gagctcgacgagcgggcccagcaccagcacgcgccgacggtgcagggcatcaccctggcc
tcgctgcactcggccaagggcctcgagtgggacgcggtgttcctcgtgggcctgtccgag
gggctcatgccgatctccttcgcggagacccaggccgaggtggacgaggaacggcgcctg
ctctacgtgggcatcacgcgtgcccgccagcacctgtcgctgacgtggacgctctcgcgg
ggcacgggcgggcgctccacccggcggccctcccggttcctgtgggccctcgacccgacc
ctcggcggcacccgcgagcacgccccggcccgtggttccgcggcgggcccgacggcgccg
cggcgccggggcgcgaaggtcgccgtgtgccgcacgtgcggcaagcccctcgagacggga
gccgagcgcaaggtcggccgctgcctggactgccccgccacctacgacgaggcggtgctc
gaggagctgcgcgactggcgcacccgcacggccgccgagatgcggatgcccgcgttcgtg
gtgttcacggacgccaccctcatggccatcgccgaggccatgccgaggaccccggcagag
ctcctgaaggtgcccggcctcggcaaggccaagctggagaagcacggaccggagctgctc
gagctgctgcacggcaccccgacggcctga
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