Micrococcus sp. HOU01: SOY78_09050
Help
Entry
SOY78_09050 CDS
T10249
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
micu Micrococcus sp. HOU01
Pathway
micu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOY78_09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micu03019
]
SOY78_09050
03016 Transfer RNA biogenesis [BR:
micu03016
]
SOY78_09050
Enzymes [BR:
micu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SOY78_09050
Messenger RNA biogenesis [BR:
micu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SOY78_09050
Transfer RNA biogenesis [BR:
micu03016
]
Prokaryotic type
tRNA degradation factors
SOY78_09050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_PNO1_2nd
S1_RRP5
KH_2
PCB_OB
aRib
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
WRQ43145
LinkDB
All DBs
Position
complement(1975987..1978248)
Genome browser
AA seq
753 aa
AA seq
DB search
MEGPEITFAEAVIDNGSYGKRTVRFETGRLAQQAAGAAMVYIDEETSMLSATTVGKSPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPAFVKGIRNEVQ
VVVTVTSIAPDEIYDTVAINAASLSTQLSGLPFSGPIGGVRMALMDDGSGARQWVAFPKH
SQLEGAVFNMAVAGRVVGDDVAIMMVEAEATPDSWTLVKERGAQAPTEEIVAEGLEAAKP
FIRALCEAQADLVKRAGKDPVDVPVFQDYQDDAYAAVEKLATDRLTEIFSIGDKQERESA
SDAYLLEVLEELAGEGKDFAERKGEIAKAYGSLTKQIVRRRILTDQVRIDGRGLTDIRKL
TAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLAPETAKRYMHHYNFPPYST
GETGRVGSPKRREIGHGALAERALVPVLPAREEFPYAIRQVSEALGSNGSTSMGSVCAST
LSLLNAGVPLRAPVAGIAMGLVSAEVDGQTQYAALTDILGAEDAFGDMDFKVAGTAEFVT
AIQLDTKLDGIPASVLAAALTQAREARLHILSVLNAAIDAPDEMAPTAPRIISVRIPVDK
IGAVIGPKGAMINQIQDDTGADITIEDDGTVLIGATDGASAEAARSAVNAIANPQVPEIG
ERYLGTVVKLTTFGAFLSLTPGKDGLLHVSELRKLNEGKRVDDVEDVLGVGQKVQVEITK
IDNRGKLSLSPVVAESDALAETADAIESSQIEA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcctgagatcaccttcgccgaggccgtcatcgacaacggctcgtacggcaag
cgcaccgtccgcttcgagaccgggcgcctcgcccagcaggccgccggcgccgccatggtc
tacatcgacgaggagacgtcgatgctgtccgccaccaccgtcggcaagtcgccccgcgag
ggcttcgacttcttcccgctgaccgtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccgccgcgagggccgcccgtccacggacgcgatcctcacctgc
cgcctgatcgaccgcccgctgcgcccggcgttcgtcaagggcatccgcaacgaggtccag
gtcgtcgtgaccgtcacctcgatcgccccggacgagatctacgacacggtggccatcaac
gccgcctccctgtccacgcagctgtccggcctgccgttctccggccccatcggcggcgtg
cgcatggccctcatggacgacggctccggcgcgcgccagtgggtcgcgttcccgaagcac
tcccagctcgagggcgccgtgttcaacatggccgtggccggccgcgtggtgggcgacgac
gtcgccatcatgatggtcgaggccgaggcgaccccggactcctggaccctggtcaaggag
cgcggcgcgcaggcgcccaccgaggagatcgtggccgagggcctcgaggccgccaagccc
ttcatccgcgccctgtgcgaggcccaggccgacctggtcaagcgcgccggcaaggacccg
gtggacgtccccgtgttccaggactaccaggacgacgcctacgccgccgtcgagaagctc
gccacggaccgcctgaccgagatcttctccatcggcgacaagcaggagcgcgagtcagcc
tcggacgcctacctgctcgaggtgctcgaggagctcgccggcgagggcaaggacttcgcc
gagcgcaagggcgagatcgccaaggcctacggctcccttaccaagcagatcgtgcgccgc
cgcatcctcaccgaccaggtgcgcatcgacggccgcggcctgacggacatccgcaagctg
accgcggaggtggaggtcctgccccgcgtgcacggctccgccatcttcgagcgcggcgag
acccagatcatgggcgtcaccacgctgaacatgctcaagatggagcagcagatcgactcg
ctggcgccggagactgccaagcggtacatgcaccactacaacttcccgccgtactccacc
ggcgagaccggccgcgtgggctccccgaagcgccgcgagatcggccacggcgccctcgcc
gagcgcgccctggtgcccgtgctgccggcccgcgaggagttcccctacgcgatccgccag
gtctccgaggccctcggctccaacggctcgacgtcgatgggctccgtctgcgcctccacc
ctgtccctgctgaacgcgggcgtgccgctgcgtgcgcccgtggccggcatcgccatgggc
ctggtctccgccgaggtggacggccagacccagtacgcggccctgaccgacatcctcggc
gccgaggatgcgttcggcgacatggacttcaaggtggccggcaccgccgagttcgtcacc
gcgatccagctggacaccaagctggacggcatcccggcctccgtgctggccgccgccctg
acgcaggcccgcgaggcgcgcctgcacatcctgtccgtgctgaacgccgccatcgacgcc
ccggatgagatggcccccaccgctccgcggatcatctccgtgcgcatcccggtggacaag
atcggcgcggtcatcggccccaagggcgccatgatcaaccagatccaggacgacacgggc
gcggacatcaccatcgaggacgacggcaccgtgctgatcggcgccaccgacggcgcctcg
gccgaggccgcgcgctccgcggtgaacgcgatcgccaacccgcaggtccccgagatcggc
gagcggtacctcggcaccgtcgtgaagctgaccacgttcggcgcgttcctctcgctcacc
ccgggcaaggacggtctgctgcacgtctccgagctgcgcaagctcaacgagggcaagcgc
gtggacgacgtcgaggacgtgctcggcgtgggccagaaggtccaggtcgagatcaccaag
atcgacaaccgcggcaagctgtccctctccccggtggtggcggagtccgacgccctggcc
gagaccgcggacgcgatcgagtcctcgcagatcgaggcctga
DBGET
integrated database retrieval system
