Micrococcus sp. HOU01: SOY78_09085
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Entry
SOY78_09085 CDS
T10249
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
micu Micrococcus sp. HOU01
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micu03016
]
SOY78_09085 (truB)
Enzymes [BR:
micu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOY78_09085 (truB)
Transfer RNA biogenesis [BR:
micu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOY78_09085 (truB)
Prokaryotic type
SOY78_09085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WRQ43152
LinkDB
All DBs
Position
complement(1982552..1983448)
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AA seq
298 aa
AA seq
DB search
MDKPQGWTSHDVVGRVRRLAGTRKVGHAGTLDPMATGLLVVGVNKATRLLTAITGTDKTY
TATIRLGQSTVTDDAEGEVVQTRLANAVTPERVAEQVAALTGEILQAPSAVSAVKVAGRR
AYDRVRAGEDVTLDARPVTVHEFTVHELRRLDGGRLVDLDVTVRCSSGTYIRALARDLGE
ALETGGHLTALRRTAVGPFDVADALSLEALAERFAMTELSEAAAGLFPVRELTEHEAHEL
AFGRVVAPTGTGETLVAGRAPDGRVIALVSDVRRRGADVAKPQLVFAPAEGPGQGRTA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagccgcaggggtggacctcgcacgacgtcgtcgggcgggtccgccggctggcg
ggcacccgcaaggtgggccacgccggcaccctggaccccatggccacgggcctgctcgtg
gtcggcgtcaacaaggccacgcgcctgctgaccgccatcacgggcacggacaagacgtac
acggccacgatccggctcgggcagtcgaccgtcacggacgacgcggagggcgaggtcgtg
cagacccggctggccaacgccgtcacgcccgagcgcgtggccgagcaggtcgccgccctc
acgggcgagatcctgcaggcgccctcggccgtctccgccgtcaaggtggcgggccggcgc
gcctacgaccgcgtccgcgcgggagaggacgtcaccctcgacgcccgccccgtcaccgtg
cacgagttcacggtgcacgagctgcgccggctcgacggcggccggctggtcgacctcgac
gtcaccgtgcgctgctcctccgggacctacatccgggcgctcgcccgcgacctgggcgag
gccctcgagaccggcgggcacctcacggcgctgcgccgcaccgccgtcggcccgttcgac
gtggccgacgcgctctcgctcgaggccctcgcggagcgcttcgcgatgaccgagctctcc
gaggccgccgccgggctcttcccggtgcgcgagctgacggagcacgaggcccacgagctc
gccttcgggcgggtcgtggcgcccaccggcacgggtgagacgctcgtcgccgggcgcgcg
ccggacggccgcgtcatcgccctcgtctccgacgtgcgccgccgcggcgccgacgtcgcc
aagccccagctcgtgttcgccccggccgaggggccgggacagggaaggaccgcatga
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