Micrococcus sp. HOU01: SOY78_10615
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Entry
SOY78_10615 CDS
T10249
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micu Micrococcus sp. HOU01
Pathway
micu03420
Nucleotide excision repair
micu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOY78_10615 (pcrA)
03430 Mismatch repair
SOY78_10615 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micu03400
]
SOY78_10615 (pcrA)
Enzymes [BR:
micu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOY78_10615 (pcrA)
DNA repair and recombination proteins [BR:
micu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOY78_10615 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SOY78_10615 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WRQ43435
LinkDB
All DBs
Position
complement(2309437..2311998)
Genome browser
AA seq
853 aa
AA seq
DB search
MADLFSALGRTPLNLDRTRRPADPETALPGLVPPAVTRAAADPEAWGEDVRPAAPTHTPE
SLVAGLNPQQAAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTN
KAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYNSADSLRLVT
TVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYTARL
RQANALDFDNLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAG
DPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILD
AANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIATTIDRLQDEDGIRPADV
AVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRI
LNEPKRGIGDRAEGAIAAWAERNRSTFSAALRDAENAPGMAARSLKAVRGFVQMMDDLGQ
VAESAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFETTHPDGTLSD
FLEQVALVADADQLPTAPDVEGEALAEQQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPH
ARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPETLID
WEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDGARPQRLTRGDEPADLTVPS
GVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFDVTGAQKR
LLLRYAPLTKVEG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctcttctccgcgctcggacgcacgcccctgaacctcgaccgcacccgccgc
ccggcggacccggagaccgccctgcccgggctcgtgcccccggccgtcacgcgcgcggcc
gcggaccccgaggcctggggcgaggacgtccggccggccgcgccgacgcacactcccgag
tcgctcgtggcggggctcaacccgcagcaggcagccgcggtgacccacacgggggcgccg
ctgctgatcgtggcgggcgccggctcgggcaagacccgggtgctgacccaccgcatcgcg
tggctgctcgccaccggacgggcgcggccgcacgagatcctcgccatcaccttcacgaac
aaggccgccgcggagatgcgcgagcgcgtggccggtctgatcggtcccaccgcccagcgg
atgtggatctccacgttccactcctccgccgtgcggctactgcgcaacgaggccgccaac
atcgggctgaagtccacgttcaccatctacaactcggcggacagcctgcgcctggtcacc
accgtcgccaagcagcacgagctggacccgaagcgcttcgcgcccaaggccctgctgaac
cgcatcagctccctgaagaacgagctcgtggaggcggacgactacgccgccaccgtggcc
gagggggacccgtggggccgcgccgtcgccgccgtctaccgggactacacggcccgcctg
cgccaggccaacgccctggacttcgacaacctgatcggcatgacggtccacatgttcgag
gcgttcccgcgcgtgctggacaactaccgccgccggttccgccacgtcctcgtggacgag
taccaggacaccaaccacgcccagtaccgcctgatccggctcctcgccggcccggcgggt
gaccccgagggcgtggagacccccggcggcgagctgacggtcgtcggcgactcggaccag
tccatctacgcgttccgcggcgcggacatccgcaacatcgtcgagttcgagcaggacttc
acggacgccgtcaccatcaagctcgagcagaactaccgctccacgcagaccatcctggac
gccgccaacgcggtgatcgagcgcaacccggaccgccgtcccaagcgcctgtggacggcc
gagggggagggccccgcgatcgtcggctacgccgcggagaacgagtccgccgaggcggag
tggatcgccaccaccatcgaccggctgcaggacgaggacgggatccgcccggccgacgtc
gccgtgttctaccggaccaacgcgcagtcccgtgcgctcgaggagcggctggtgacgcgc
ggcatcccgtaccgggtcatcggcggcacgcgcttctacgaccgcaaggagatcaaggac
gcgctcgcctacctgcgggtgatcgtcaaccccgacgacgacgtcaacgtgcgccgcatc
ctcaacgagcccaaacggggcatcggggaccgggccgagggcgccatcgccgcgtgggcc
gagcgcaaccgctccacgttctccgcggccctgcgcgacgccgagaacgcccccggcatg
gccgcccgctcgctcaaggccgtccgcggcttcgtgcagatgatggacgacctcggccag
gtcgccgagtccgccggcccggccaccgtcctggaggccgtcctcgagcagtctgggatg
ctggccgccctccgcgagtccgaggacctgcaggacgagtcccgcgcggacaacctcggc
gagctcgtcgccgtcgtccgctccttcgagacgacgcacccggacggcaccctgtccgac
ttcctcgagcaggtggcgctcgtggcggacgcagaccagctgcccacggccccggacgtg
gagggcgaggcgctcgccgagcagcagggccaggtcacgctcatgacgctgcacaccgcc
aagggcctcgagttccccgtggtgttcctgacgggcatggagcacggggtgttcccgcac
gcccgctcgatgacggacgagaaggagctcgcggaggagcgtcgcctcgcgtacgtgggc
ctgacgcgcgcccgccgtcgcctgttcctgacgcgcgccgaggcacgctcgctgtggggc
cagcaccagttcaacccgcccagccagttcctcggggagatcccggagacgctcatcgac
tgggagcgggagggcaccacccgctcggccggctcgttgagcctgaccggcgccggcacc
tcgcgctacgcggggcggttcggcggcgggcggccggcctggcggtcccgggacgacgac
ggcgcgcggccccagcgcctcacccgcggggacgagccggcggacctcacggtgccctcc
ggtgtggtgcgcgggaaggcgccgagccgggtgcagccgcagaaggagatcgtggcgctc
agcccaggtgaccgcgtctcccacgcgaccttcggcgaggggcgcgtggacgccgtcgcg
ggcgccggggacaagaccgtcgcgaccgtcaccttcgacgtcaccggggcgcagaagcgg
ctgctgctgcgctacgccccgctgacgaaggtcgagggctga
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